Cow genome map

Conread name: Lym2-sn67_H09.f

Conread position: 208-615
Cow position: chr11:9733598-9734010 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 216-561
Cow position: chr11:26069949-26070316 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 165

Conread position: 216-615
Cow position: chr11:3856309-3855895 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 217-403
Cow position: chr11:27657529-27657335 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 217-432
Cow position: chr11:1494938-1495170 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 217-432
Cow position: chr11:67154781-67154549 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 217-485
Cow position: chr11:21898748-21899044 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 160

Conread position: 217-489
Cow position: chr11:50042053-50042341 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 62

Conread position: 217-552
Cow position: chr11:40774902-40775266 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 217-554
Cow position: chr11:23881127-23880760 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 217-554
Cow position: chr11:49553084-49553432 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 51

Conread position: 217-557
Cow position: chr11:66730182-66729822 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 217-560
Cow position: chr11:57626956-57627329 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 217-561
Cow position: chr11:4026512-4026887 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 190

Conread position: 217-568
Cow position: chr11:9156055-9156435 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 217-611
Cow position: chr11:67451589-67451159 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 299
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 27, 196

Conread position: 217-612
Cow position: chr11:3494085-3493658 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 155

Conread position: 217-612
Cow position: chr11:14727959-14728371 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 272
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 345

Conread position: 217-612
Cow position: chr11:31927246-31926833 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 270
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 73

Conread position: 217-615
Cow position: chr11:1489072-1489485 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 142

Conread position: 217-615
Cow position: chr11:4269305-4269741 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr11:10848548-10848112 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 155

Conread position: 217-615
Cow position: chr11:11989229-11988787 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr11:12357315-12357754 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr11:17106586-17107024 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 154

Conread position: 217-615
Cow position: chr11:17547259-17546825 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 313

Conread position: 217-615
Cow position: chr11:19062976-19063411 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 304
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 27, 200

Conread position: 217-615
Cow position: chr11:19101397-19101834 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr11:20733142-20733580 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr11:26123834-26124265 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 354

Conread position: 217-615
Cow position: chr11:26548621-26548172 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 321

Conread position: 217-615
Cow position: chr11:28228672-28229095 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 383

Conread position: 217-615
Cow position: chr11:29667510-29667946 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 217-615
Cow position: chr11:31861973-31861559 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 217-615
Cow position: chr11:32452924-32452488 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr11:38834352-38834774 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 109

Conread position: 217-615
Cow position: chr11:44582246-44582674 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 217-615
Cow position: chr11:47759184-47759622 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 84

Conread position: 217-615
Cow position: chr11:58135490-58135055 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr11:61399985-61400403 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 177

Conread position: 217-615
Cow position: chr11:63654238-63654676 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 161

Conread position: 217-615
Cow position: chr11:67845474-67845904 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 154

Conread position: 217-615
Cow position: chr11:71330691-71330251 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 217-615
Cow position: chr11:85392738-85393153 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 62

Conread position: 220-552
Cow position: chr11:52420496-52420133 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 220-561
Cow position: chr11:28392058-28391683 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 16

Conread position: 220-565
Cow position: chr11:73134383-73134007 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 220-611
Cow position: chr11:4056410-4056811 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 164

Conread position: 220-615
Cow position: chr11:44252875-44252457 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 110

Conread position: 221-537
Cow position: chr11:30122753-30123091 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 310

Conread position: 221-553
Cow position: chr11:15943272-15943614 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 52

Conread position: 221-615
Cow position: chr11:13064903-13065304 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 21

Conread position: 221-615
Cow position: chr11:24394407-24393977 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 221-615
Cow position: chr11:42311352-42311780 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 221-615
Cow position: chr11:45921515-45921948 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 225

Conread position: 221-615
Cow position: chr11:72309946-72310373 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 223-413
Cow position: chr11:21928111-21928306 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 224-615
Cow position: chr11:44156164-44156586 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 226-612
Cow position: chr11:29612908-29613329 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 302

Conread position: 226-615
Cow position: chr11:43513550-43513971 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 163

Conread position: 226-615
Cow position: chr11:44517777-44518204 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 194

Conread position: 229-552
Cow position: chr11:24336137-24336466 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 22

Conread position: 231-554
Cow position: chr11:9224483-9224820 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 8

Conread position: 231-612
Cow position: chr11:28053564-28053950 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 48, 75

Conread position: 242-615
Cow position: chr11:41169629-41170034 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 246-615
Cow position: chr11:18887898-18887518 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 56, 49

Conread position: 247-557
Cow position: chr11:74424657-74424323 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 247-557
Cow position: chr11:76372935-76373259 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 134

Conread position: 247-565
Cow position: chr11:30253296-30252954 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 247-614
Cow position: chr11:31540189-31539796 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 255
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 133

Conread position: 249-512
Cow position: chr11:87142639-87142353 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 125

Conread position: 249-611
Cow position: chr11:75553939-75554311 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 60

Conread position: 257-605
Cow position: chr11:81851675-81852038 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 68

Conread position: 301-452
Cow position: chr11:32982834-32982986 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 23

Conread position: 306-484
Cow position: chr11:15985809-15985633 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 17

Conread position: 306-615
Cow position: chr11:28109124-28108798 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 17

Conread position: 307-523
Cow position: chr11:27669217-27669436 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 14

Conread position: 307-551
Cow position: chr11:19071232-19071481 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 14

Conread position: 313-551
Cow position: chr11:37476003-37476251 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 121, 7

Conread position: 313-560
Cow position: chr11:53431070-53431326 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 313-612
Cow position: chr11:15898011-15898327 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 7

Conread position: 314-489
Cow position: chr11:33977478-33977663 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 6

Conread position: 322-560
Cow position: chr11:20506199-20505953 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 322-560
Cow position: chr11:20511575-20511329 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 322-615
Cow position: chr11:29232046-29232353 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 330-559
Cow position: chr11:28065052-28064820 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 12

Conread position: 331-504
Cow position: chr11:44490656-44490834 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 332-615
Cow position: chr11:37358258-37357949 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 32

Conread position: 353-615
Cow position: chr11:54484474-54484751 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 143

Conread position: 369-615
Cow position: chr11:23126980-23127236 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 55

Conread position: 384-527
Cow position: chr11:27657213-27657061 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 459-615
Cow position: chr11:22935917-22935755 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 83

Show alignments to all cow chromosomes.