Cow genome map

Conread name: Lym2-sn67_H09.f

Conread position: 216-615
Cow position: chr13:31555589-31556013 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 42

Conread position: 217-425
Cow position: chr13:34908868-34909087 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 91

Conread position: 217-430
Cow position: chr13:31508073-31507846 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 217-431
Cow position: chr13:34343069-34342835 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 23, 143

Conread position: 217-432
Cow position: chr13:26845432-26845215 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 68

Conread position: 217-491
Cow position: chr13:17998722-17998418 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 217-503
Cow position: chr13:50661442-50661163 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 24

Conread position: 217-540
Cow position: chr13:28860328-28859987 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 246

Conread position: 217-540
Cow position: chr13:48358797-48358456 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 217-553
Cow position: chr13:678914-678549 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 254
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 217-557
Cow position: chr13:32984181-32984548 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-560
Cow position: chr13:5624830-5625196 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 217-560
Cow position: chr13:13326092-13325721 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 217-560
Cow position: chr13:32546555-32546183 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 358

Conread position: 217-560
Cow position: chr13:35758449-35758075 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 213

Conread position: 217-560
Cow position: chr13:44652665-44653022 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 101, 24

Conread position: 217-561
Cow position: chr13:23001845-23002217 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 160

Conread position: 217-563
Cow position: chr13:11793918-11794250 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 92

Conread position: 217-572
Cow position: chr13:31729730-31730114 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 351

Conread position: 217-612
Cow position: chr13:34041171-34041604 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 300

Conread position: 217-612
Cow position: chr13:50110616-50110183 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 292
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr13:3653150-3653590 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr13:4484955-4484523 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 308
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 187

Conread position: 217-615
Cow position: chr13:4942548-4942114 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 315

Conread position: 217-615
Cow position: chr13:6666970-6667404 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr13:9045927-9045498 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 217-615
Cow position: chr13:13901031-13900598 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 160

Conread position: 217-615
Cow position: chr13:14401943-14402368 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 54

Conread position: 217-615
Cow position: chr13:15519362-15519777 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 230

Conread position: 217-615
Cow position: chr13:15923216-15923650 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 217-615
Cow position: chr13:30654231-30654651 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 131

Conread position: 217-615
Cow position: chr13:34049900-34049467 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 287
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 59

Conread position: 217-615
Cow position: chr13:34938607-34938194 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 170

Conread position: 217-615
Cow position: chr13:43590487-43590061 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 40

Conread position: 217-615
Cow position: chr13:47228834-47229275 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 220-552
Cow position: chr13:30239475-30239125 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 244

Conread position: 220-615
Cow position: chr13:31611170-31611577 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 220-615
Cow position: chr13:34324419-34324830 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 221-615
Cow position: chr13:5627687-5628088 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 85, 58

Conread position: 221-615
Cow position: chr13:11797565-11797981 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 347

Conread position: 221-615
Cow position: chr13:14177689-14178108 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 287
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 67

Conread position: 221-615
Cow position: chr13:15543700-15543270 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 226-615
Cow position: chr13:17309625-17309202 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 192

Conread position: 227-612
Cow position: chr13:25692827-25692416 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 233-553
Cow position: chr13:15449981-15450320 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 14

Conread position: 242-476
Cow position: chr13:32924006-32924234 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 42

Conread position: 242-615
Cow position: chr13:17330645-17331034 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 24

Conread position: 242-615
Cow position: chr13:49974800-49974406 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 217

Conread position: 243-615
Cow position: chr13:21839060-21839469 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 110

Conread position: 248-605
Cow position: chr13:12633657-12633306 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 21

Conread position: 280-614
Cow position: chr13:43982017-43982368 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 306-568
Cow position: chr13:2387753-2388024 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 129, 0

Conread position: 306-615
Cow position: chr13:21697307-21696981 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 8, 17

Conread position: 307-615
Cow position: chr13:57823629-57823940 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 139

Conread position: 313-615
Cow position: chr13:1592111-1592425 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 9

Conread position: 313-615
Cow position: chr13:30304341-30304013 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 69, 9

Conread position: 320-615
Cow position: chr13:16254344-16254654 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 37

Conread position: 322-615
Cow position: chr13:42217873-42218183 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 66, 74

Conread position: 357-553
Cow position: chr13:30278618-30278415 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 16

Conread position: 357-615
Cow position: chr13:32736821-32737094 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 375-614
Cow position: chr13:34153772-34154030 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 0

Conread position: 384-612
Cow position: chr13:11739909-11740150 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 99

Conread position: 444-615
Cow position: chr13:20541146-20541316 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 15

Conread position: 457-615
Cow position: chr13:47861722-47861555 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Show alignments to all cow chromosomes.