Cow genome map
Conread name: | Lym2-sn67_H09.f |
Conread position: | 216-615 |
Cow position: | chr13:31555589-31556013 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 286 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 7, 42 |
Conread position: | 217-425 |
Cow position: | chr13:34908868-34909087 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 165 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 33, 91 |
Conread position: | 217-430 |
Cow position: | chr13:31508073-31507846 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 167 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-431 |
Cow position: | chr13:34343069-34342835 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 174 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 23, 143 |
Conread position: | 217-432 |
Cow position: | chr13:26845432-26845215 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 146 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 36, 68 |
Conread position: | 217-491 |
Cow position: | chr13:17998722-17998418 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 216 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-503 |
Cow position: | chr13:50661442-50661163 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 196 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 70, 24 |
Conread position: | 217-540 |
Cow position: | chr13:28860328-28859987 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 236 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 27, 246 |
Conread position: | 217-540 |
Cow position: | chr13:48358797-48358456 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 22 |
Conread position: | 217-553 |
Cow position: | chr13:678914-678549 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 254 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-557 |
Cow position: | chr13:32984181-32984548 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-560 |
Cow position: | chr13:5624830-5625196 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 217-560 |
Cow position: | chr13:13326092-13325721 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 260 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-560 |
Cow position: | chr13:32546555-32546183 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 358 |
Conread position: | 217-560 |
Cow position: | chr13:35758449-35758075 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 213 |
Conread position: | 217-560 |
Cow position: | chr13:44652665-44653022 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 251 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 101, 24 |
Conread position: | 217-561 |
Cow position: | chr13:23001845-23002217 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 160 |
Conread position: | 217-563 |
Cow position: | chr13:11793918-11794250 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 92 |
Conread position: | 217-572 |
Cow position: | chr13:31729730-31730114 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 351 |
Conread position: | 217-612 |
Cow position: | chr13:34041171-34041604 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 300 |
Conread position: | 217-612 |
Cow position: | chr13:50110616-50110183 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 292 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr13:3653150-3653590 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-615 |
Cow position: | chr13:4484955-4484523 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 308 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 24, 187 |
Conread position: | 217-615 |
Cow position: | chr13:4942548-4942114 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 315 |
Conread position: | 217-615 |
Cow position: | chr13:6666970-6667404 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-615 |
Cow position: | chr13:9045927-9045498 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 217-615 |
Cow position: | chr13:13901031-13900598 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 304 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 24, 160 |
Conread position: | 217-615 |
Cow position: | chr13:14401943-14402368 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 54 |
Conread position: | 217-615 |
Cow position: | chr13:15519362-15519777 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 230 |
Conread position: | 217-615 |
Cow position: | chr13:15923216-15923650 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 217-615 |
Cow position: | chr13:30654231-30654651 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 131 |
Conread position: | 217-615 |
Cow position: | chr13:34049900-34049467 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 287 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 20, 59 |
Conread position: | 217-615 |
Cow position: | chr13:34938607-34938194 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 170 |
Conread position: | 217-615 |
Cow position: | chr13:43590487-43590061 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 40 |
Conread position: | 217-615 |
Cow position: | chr13:47228834-47229275 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 305 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 220-552 |
Cow position: | chr13:30239475-30239125 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 244 |
Conread position: | 220-615 |
Cow position: | chr13:31611170-31611577 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 42 |
Conread position: | 220-615 |
Cow position: | chr13:34324419-34324830 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 68 |
Conread position: | 221-615 |
Cow position: | chr13:5627687-5628088 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 279 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 85, 58 |
Conread position: | 221-615 |
Cow position: | chr13:11797565-11797981 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 347 |
Conread position: | 221-615 |
Cow position: | chr13:14177689-14178108 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 287 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 20, 67 |
Conread position: | 221-615 |
Cow position: | chr13:15543700-15543270 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 226-615 |
Cow position: | chr13:17309625-17309202 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 290 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 18, 192 |
Conread position: | 227-612 |
Cow position: | chr13:25692827-25692416 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 155 |
Conread position: | 233-553 |
Cow position: | chr13:15449981-15450320 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 14 |
Conread position: | 242-476 |
Cow position: | chr13:32924006-32924234 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 170 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 80, 42 |
Conread position: | 242-615 |
Cow position: | chr13:17330645-17331034 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 277 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 37, 24 |
Conread position: | 242-615 |
Cow position: | chr13:49974800-49974406 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 271 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 37, 217 |
Conread position: | 243-615 |
Cow position: | chr13:21839060-21839469 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 288 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 35, 110 |
Conread position: | 248-605 |
Cow position: | chr13:12633657-12633306 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 233 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 7, 21 |
Conread position: | 280-614 |
Cow position: | chr13:43982017-43982368 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 22 |
Conread position: | 306-568 |
Cow position: | chr13:2387753-2388024 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 306-615 |
Cow position: | chr13:21697307-21696981 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 230 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 8, 17 |
Conread position: | 307-615 |
Cow position: | chr13:57823629-57823940 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 200 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 41, 139 |
Conread position: | 313-615 |
Cow position: | chr13:1592111-1592425 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 231 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 120, 9 |
Conread position: | 313-615 |
Cow position: | chr13:30304341-30304013 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 241 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 69, 9 |
Conread position: | 320-615 |
Cow position: | chr13:16254344-16254654 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 37 |
Conread position: | 322-615 |
Cow position: | chr13:42217873-42218183 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 66, 74 |
Conread position: | 357-553 |
Cow position: | chr13:30278618-30278415 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 357-615 |
Cow position: | chr13:32736821-32737094 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 375-614 |
Cow position: | chr13:34153772-34154030 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 384-612 |
Cow position: | chr13:11739909-11740150 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 166 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 57, 99 |
Conread position: | 444-615 |
Cow position: | chr13:20541146-20541316 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 120, 15 |
Conread position: | 457-615 |
Cow position: | chr13:47861722-47861555 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.