Cow genome map

Conread name: Lym2-sn67_H09.f

Conread position: 217-422
Cow position: chr14:13579422-13579207 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 171

Conread position: 217-430
Cow position: chr14:37454891-37455107 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 92

Conread position: 217-432
Cow position: chr14:23256325-23256551 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 217-452
Cow position: chr14:35384787-35385030 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 40

Conread position: 217-501
Cow position: chr14:30736209-30735895 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 200

Conread position: 217-504
Cow position: chr14:48402119-48402427 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 115

Conread position: 217-527
Cow position: chr14:45678043-45678379 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 217-540
Cow position: chr14:12124144-12124485 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 246

Conread position: 217-549
Cow position: chr14:17490419-17490769 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 246

Conread position: 217-552
Cow position: chr14:13620103-13620467 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 217-553
Cow position: chr14:13274644-13274284 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 49

Conread position: 217-553
Cow position: chr14:40168697-40169043 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 241

Conread position: 217-554
Cow position: chr14:1659494-1659128 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 27, 201

Conread position: 217-554
Cow position: chr14:48826320-48825960 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 282

Conread position: 217-555
Cow position: chr14:46466706-46466366 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 283

Conread position: 217-557
Cow position: chr14:13863058-13863420 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-560
Cow position: chr14:2295308-2294953 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 90

Conread position: 217-560
Cow position: chr14:44690110-44689737 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 217-605
Cow position: chr14:29581197-29580780 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 272
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 14

Conread position: 217-605
Cow position: chr14:45710690-45711107 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 273

Conread position: 217-607
Cow position: chr14:44775002-44775425 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 190

Conread position: 217-612
Cow position: chr14:18105466-18105075 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 258
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 24

Conread position: 217-615
Cow position: chr14:751606-751170 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 285

Conread position: 217-615
Cow position: chr14:7473390-7472961 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 217-615
Cow position: chr14:10147913-10147477 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr14:11153111-11153554 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 217-615
Cow position: chr14:16272257-16272692 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 217-615
Cow position: chr14:17000018-17000455 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 217-615
Cow position: chr14:17759849-17760276 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 60

Conread position: 217-615
Cow position: chr14:19327224-19327663 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 230

Conread position: 217-615
Cow position: chr14:27978394-27977965 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 289
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 24

Conread position: 217-615
Cow position: chr14:38148037-38147612 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 216

Conread position: 217-615
Cow position: chr14:45082094-45081654 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 307
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 355

Conread position: 217-615
Cow position: chr14:48253305-48253707 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 13

Conread position: 217-615
Cow position: chr14:50139603-50139166 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 303
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 24, 357

Conread position: 218-605
Cow position: chr14:45207326-45206926 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 13

Conread position: 220-485
Cow position: chr14:5513966-5513679 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 220-615
Cow position: chr14:5530072-5529675 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 17

Conread position: 220-615
Cow position: chr14:13779966-13779543 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 108

Conread position: 220-615
Cow position: chr14:16918682-16919113 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 340

Conread position: 220-615
Cow position: chr14:37225208-37224795 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 220-615
Cow position: chr14:46530246-46529828 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 147

Conread position: 220-615
Cow position: chr14:50111816-50111393 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 221-524
Cow position: chr14:44552873-44552556 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 16

Conread position: 221-602
Cow position: chr14:13303986-13303589 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 8

Conread position: 221-612
Cow position: chr14:30595356-30595758 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 221-615
Cow position: chr14:33678098-33677667 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 26

Conread position: 221-615
Cow position: chr14:43559271-43558840 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 178

Conread position: 221-615
Cow position: chr14:44227411-44227003 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 327

Conread position: 223-490
Cow position: chr14:44255725-44256021 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 75

Conread position: 223-505
Cow position: chr14:13462547-13462243 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 19

Conread position: 223-615
Cow position: chr14:22030420-22030842 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 223-615
Cow position: chr14:48601311-48601737 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 13

Conread position: 224-512
Cow position: chr14:24996569-24996858 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 123

Conread position: 226-612
Cow position: chr14:46391508-46391926 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 229-612
Cow position: chr14:38228628-38229007 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 104

Conread position: 229-615
Cow position: chr14:12900123-12899699 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 232-417
Cow position: chr14:191049-190863 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 92

Conread position: 232-615
Cow position: chr14:10520479-10520885 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 32

Conread position: 233-553
Cow position: chr14:16342822-16343145 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 199
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 79, 91

Conread position: 233-615
Cow position: chr14:12611446-12611054 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 158

Conread position: 235-557
Cow position: chr14:44582379-44582031 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 38

Conread position: 242-615
Cow position: chr14:35425080-35424693 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 110

Conread position: 243-502
Cow position: chr14:29775069-29775357 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 243-553
Cow position: chr14:46637555-46637238 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 36, 126

Conread position: 243-554
Cow position: chr14:29046675-29047012 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 243-615
Cow position: chr14:12742058-12742463 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 248-612
Cow position: chr14:29706042-29705667 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 242
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 37

Conread position: 250-551
Cow position: chr14:47939991-47940298 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 34

Conread position: 252-565
Cow position: chr14:40342053-40341716 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 136

Conread position: 279-549
Cow position: chr14:48705364-48705086 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 198

Conread position: 293-615
Cow position: chr14:32447734-32447397 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 306-612
Cow position: chr14:2285258-2284945 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 17

Conread position: 306-615
Cow position: chr14:33392868-33393183 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 306-615
Cow position: chr14:45671117-45671443 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 17

Conread position: 313-440
Cow position: chr14:15274928-15275054 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 313-561
Cow position: chr14:45162949-45162706 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 9

Conread position: 313-615
Cow position: chr14:20783377-20783063 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 12

Conread position: 321-615
Cow position: chr14:38530543-38530855 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 113, 206

Conread position: 330-558
Cow position: chr14:30584046-30584283 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 111, 182

Conread position: 331-552
Cow position: chr14:37412844-37413068 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 92

Conread position: 340-605
Cow position: chr14:33604635-33604352 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 352-615
Cow position: chr14:11561141-11561426 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 26

Conread position: 356-615
Cow position: chr14:44378678-44378402 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 78, 121

Conread position: 422-615
Cow position: chr14:17686213-17686003 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 435-612
Cow position: chr14:15275437-15275626 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 437-615
Cow position: chr14:190755-190571 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 7

Conread position: 477-615
Cow position: chr14:5512574-5512428 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.