Cow genome map
Conread name: | Lym2-sn67_H09.f |
Conread position: | 214-552 |
Cow position: | chr16:11284288-11283925 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 250 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 65, 28 |
Conread position: | 216-615 |
Cow position: | chr16:25086313-25085879 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 329 |
Conread position: | 217-419 |
Cow position: | chr16:28470376-28470599 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-465 |
Cow position: | chr16:54324642-54324904 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 23, 196 |
Conread position: | 217-468 |
Cow position: | chr16:25258516-25258248 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 189 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 217-479 |
Cow position: | chr16:25001600-25001892 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 210 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 24, 81 |
Conread position: | 217-483 |
Cow position: | chr16:27732688-27732966 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 204 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 217-519 |
Cow position: | chr16:47474949-47474616 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 236 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 27, 71 |
Conread position: | 217-539 |
Cow position: | chr16:51084849-51084497 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 240 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 24, 288 |
Conread position: | 217-557 |
Cow position: | chr16:29047719-29047351 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 211 |
Conread position: | 217-558 |
Cow position: | chr16:34530994-34530653 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 258 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 217-560 |
Cow position: | chr16:4478277-4478645 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-560 |
Cow position: | chr16:49255533-49255898 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 204 |
Conread position: | 217-565 |
Cow position: | chr16:28196547-28196921 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 262 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 29, 306 |
Conread position: | 217-571 |
Cow position: | chr16:23809017-23808655 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 97 |
Conread position: | 217-598 |
Cow position: | chr16:27714125-27714521 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 270 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 41, 30 |
Conread position: | 217-607 |
Cow position: | chr16:3330633-3330207 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-611 |
Cow position: | chr16:25342636-25342236 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 14 |
Conread position: | 217-614 |
Cow position: | chr16:23535196-23535627 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 217-614 |
Cow position: | chr16:23671364-23670961 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 274 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 10, 31 |
Conread position: | 217-614 |
Cow position: | chr16:31591220-31591655 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 341 |
Conread position: | 217-615 |
Cow position: | chr16:406343-406776 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 285 |
Conread position: | 217-615 |
Cow position: | chr16:838012-837576 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 159 |
Conread position: | 217-615 |
Cow position: | chr16:1432883-1432448 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 106 |
Conread position: | 217-615 |
Cow position: | chr16:2482439-2482876 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 361 |
Conread position: | 217-615 |
Cow position: | chr16:5485423-5484994 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 138 |
Conread position: | 217-615 |
Cow position: | chr16:6715903-6716326 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 282 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 113 |
Conread position: | 217-615 |
Cow position: | chr16:8815407-8815843 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 217-615 |
Cow position: | chr16:15185772-15185335 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 217-615 |
Cow position: | chr16:15477537-15477104 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 285 |
Conread position: | 217-615 |
Cow position: | chr16:18497623-18498025 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 62 |
Conread position: | 217-615 |
Cow position: | chr16:21186313-21185877 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 300 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr16:25442325-25441891 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 212 |
Conread position: | 217-615 |
Cow position: | chr16:25456783-25457199 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 209 |
Conread position: | 217-615 |
Cow position: | chr16:26664450-26664013 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 213 |
Conread position: | 217-615 |
Cow position: | chr16:26978817-26978401 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 283 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 46, 188 |
Conread position: | 217-615 |
Cow position: | chr16:27594201-27593769 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 292 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr16:28169656-28170101 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 313 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 27, 201 |
Conread position: | 217-615 |
Cow position: | chr16:40295496-40295914 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 13 |
Conread position: | 217-615 |
Cow position: | chr16:49233939-49234368 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 224 |
Conread position: | 220-440 |
Cow position: | chr16:37455318-37455546 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 59, 21 |
Conread position: | 220-537 |
Cow position: | chr16:19638749-19638409 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 244 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 11, 159 |
Conread position: | 220-553 |
Cow position: | chr16:20202664-20202332 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 29, 12 |
Conread position: | 220-555 |
Cow position: | chr16:16898143-16897789 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 200 |
Conread position: | 220-613 |
Cow position: | chr16:10374905-10375335 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 297 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 17, 153 |
Conread position: | 220-615 |
Cow position: | chr16:1566762-1567190 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 27 |
Conread position: | 220-615 |
Cow position: | chr16:7675779-7676194 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 88 |
Conread position: | 220-615 |
Cow position: | chr16:23983970-23983560 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 45 |
Conread position: | 221-506 |
Cow position: | chr16:2726558-2726850 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 209 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 58, 26 |
Conread position: | 221-612 |
Cow position: | chr16:9209647-9209243 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 269 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 20, 86 |
Conread position: | 221-615 |
Cow position: | chr16:43896606-43897013 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 24 |
Conread position: | 222-615 |
Cow position: | chr16:56120355-56119934 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 289 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 28, 64 |
Conread position: | 225-554 |
Cow position: | chr16:5890676-5890343 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 239 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 58, 16 |
Conread position: | 225-560 |
Cow position: | chr16:41162399-41162735 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 201 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 94, 16 |
Conread position: | 226-555 |
Cow position: | chr16:41762505-41762172 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 226 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 65 |
Conread position: | 226-615 |
Cow position: | chr16:25189337-25188911 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 296 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 18, 275 |
Conread position: | 227-614 |
Cow position: | chr16:12668101-12668503 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 267 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 13, 141 |
Conread position: | 242-530 |
Cow position: | chr16:29984741-29984445 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 80, 261 |
Conread position: | 242-615 |
Cow position: | chr16:12537288-12537664 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 251 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 37, 88 |
Conread position: | 242-615 |
Cow position: | chr16:14665144-14665547 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 309 |
Conread position: | 242-615 |
Cow position: | chr16:15567925-15567517 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 243-614 |
Cow position: | chr16:56916404-56916801 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 59 |
Conread position: | 243-615 |
Cow position: | chr16:3088537-3088939 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 285 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 39, 308 |
Conread position: | 243-615 |
Cow position: | chr16:5662503-5662105 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 275 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 36, 328 |
Conread position: | 244-553 |
Cow position: | chr16:41165986-41166313 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 72 |
Conread position: | 244-615 |
Cow position: | chr16:25739301-25738937 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 254 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 59, 30 |
Conread position: | 249-553 |
Cow position: | chr16:17056317-17056638 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 225 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 71, 155 |
Conread position: | 249-615 |
Cow position: | chr16:25172004-25171612 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 270 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 34, 45 |
Conread position: | 253-537 |
Cow position: | chr16:42735745-42736045 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 146 |
Conread position: | 255-543 |
Cow position: | chr16:29034702-29034406 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 217 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 27, 71 |
Conread position: | 273-612 |
Cow position: | chr16:11110419-11110774 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 248 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 44, 242 |
Conread position: | 301-615 |
Cow position: | chr16:15494095-15493766 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 10 |
Conread position: | 305-612 |
Cow position: | chr16:337755-337433 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 233 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 313-615 |
Cow position: | chr16:2410388-2410703 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 9 |
Conread position: | 313-615 |
Cow position: | chr16:23251857-23252172 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 7 |
Conread position: | 315-615 |
Cow position: | chr16:10438831-10438515 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 202 |
Conread position: | 319-615 |
Cow position: | chr16:26105486-26105800 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 237 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 33, 23 |
Conread position: | 322-615 |
Cow position: | chr16:37480568-37480876 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 225 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 112, 223 |
Conread position: | 331-615 |
Cow position: | chr16:1860776-1860485 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 217 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 334-615 |
Cow position: | chr16:41754899-41755195 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 207 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 101, 251 |
Conread position: | 364-615 |
Cow position: | chr16:7464359-7464090 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 201 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 364-615 |
Cow position: | chr16:19151086-19151359 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 201 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 71, 161 |
Conread position: | 395-557 |
Cow position: | chr16:10967839-10968004 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 129 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 44, 124 |
Conread position: | 461-615 |
Cow position: | chr16:37455595-37455757 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.