Cow genome map

Conread name: Lym2-sn67_H09.f

Conread position: 217-497
Cow position: chr18:32769225-32768919 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 15

Conread position: 217-505
Cow position: chr18:37663802-37663507 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 107

Conread position: 217-508
Cow position: chr18:54170030-54170351 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 217-537
Cow position: chr18:46884172-46884490 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 146

Conread position: 217-548
Cow position: chr18:29865133-29865490 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 321

Conread position: 217-560
Cow position: chr18:27988663-27988308 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 219

Conread position: 217-566
Cow position: chr18:33270395-33270051 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 92

Conread position: 217-597
Cow position: chr18:51461574-51461991 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 217-604
Cow position: chr18:46867442-46867840 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 14

Conread position: 217-612
Cow position: chr18:11273639-11274060 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 217-612
Cow position: chr18:54004696-54005125 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 217-614
Cow position: chr18:16869865-16869465 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 82

Conread position: 217-615
Cow position: chr18:14131872-14131437 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr18:16089596-16089183 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 215

Conread position: 217-615
Cow position: chr18:16175142-16175572 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr18:19353843-19353403 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr18:27836837-27837266 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 120

Conread position: 217-615
Cow position: chr18:28972408-28972840 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 217-615
Cow position: chr18:38342816-38343231 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 243

Conread position: 217-615
Cow position: chr18:40479874-40479432 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr18:47742982-47742546 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 202

Conread position: 217-615
Cow position: chr18:51343164-51342729 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 171

Conread position: 217-615
Cow position: chr18:51482335-51481928 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 116

Conread position: 220-457
Cow position: chr18:16392615-16392861 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 27

Conread position: 220-615
Cow position: chr18:16080148-16079711 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 220-615
Cow position: chr18:41839352-41839758 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 164

Conread position: 221-480
Cow position: chr18:34044075-34043806 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 195

Conread position: 221-591
Cow position: chr18:40080964-40081333 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 91, 11

Conread position: 221-615
Cow position: chr18:29238368-29237948 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 299

Conread position: 221-615
Cow position: chr18:54022658-54023090 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 222-505
Cow position: chr18:12237673-12237390 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 5, 16

Conread position: 227-615
Cow position: chr18:36255472-36255862 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 231-557
Cow position: chr18:25352721-25352366 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 10

Conread position: 231-612
Cow position: chr18:54271920-54271542 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 83, 74

Conread position: 232-561
Cow position: chr18:19405113-19405464 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 152

Conread position: 235-615
Cow position: chr18:14417432-14417029 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 235-615
Cow position: chr18:29074435-29074038 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 54, 131

Conread position: 242-543
Cow position: chr18:56014032-56013704 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 42

Conread position: 242-615
Cow position: chr18:23799097-23798693 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 242-615
Cow position: chr18:37507408-37507005 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 242-615
Cow position: chr18:52652360-52651956 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 74

Conread position: 246-560
Cow position: chr18:40344959-40345291 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 53

Conread position: 306-615
Cow position: chr18:51661710-51661385 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 17

Conread position: 322-561
Cow position: chr18:33751612-33751372 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 35

Conread position: 331-554
Cow position: chr18:18528441-18528207 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 357-565
Cow position: chr18:42515516-42515292 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 20

Conread position: 395-615
Cow position: chr18:36509623-36509386 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 458-615
Cow position: chr18:32653427-32653261 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 0

Show alignments to all cow chromosomes.