Cow genome map
| Conread name: | Lym2-sn67_H09.f |
| Conread position: | 209-615 |
| Cow position: | chr20:35125925-35125501 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 217-425 |
| Cow position: | chr20:19341074-19340854 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 217-430 |
| Cow position: | chr20:9547094-9546878 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 217-506 |
| Cow position: | chr20:17660299-17660621 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-553 |
| Cow position: | chr20:9344402-9344047 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 217-553 |
| Cow position: | chr20:9520694-9521056 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 240 |
| Conread position: | 217-553 |
| Cow position: | chr20:15066908-15066559 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 65, 220 |
| Conread position: | 217-555 |
| Cow position: | chr20:16178321-16178691 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 217-555 |
| Cow position: | chr20:27338643-27338285 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 33, 200 |
| Conread position: | 217-558 |
| Cow position: | chr20:13678603-13678975 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 217-560 |
| Cow position: | chr20:824213-823842 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 217-615 |
| Cow position: | chr20:5536356-5535942 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 217-615 |
| Cow position: | chr20:8216955-8216521 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 217-615 |
| Cow position: | chr20:13663605-13664038 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 24, 253 |
| Conread position: | 217-615 |
| Cow position: | chr20:13764339-13763912 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 217-615 |
| Cow position: | chr20:15293424-15293010 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 217-615 |
| Cow position: | chr20:18323513-18323914 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 217-615 |
| Cow position: | chr20:19356210-19355775 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 217-615 |
| Cow position: | chr20:19439358-19438923 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chr20:21395360-21394935 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 206 |
| Conread position: | 217-615 |
| Cow position: | chr20:23468220-23468655 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 217-615 |
| Cow position: | chr20:23800329-23799891 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 184 |
| Conread position: | 217-615 |
| Cow position: | chr20:24615450-24615861 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 31, 208 |
| Conread position: | 217-615 |
| Cow position: | chr20:25849379-25849811 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr20:28162237-28161827 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 220-615 |
| Cow position: | chr20:12569942-12569528 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 221-509 |
| Cow position: | chr20:5791764-5791459 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 221-560 |
| Cow position: | chr20:22210473-22210125 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 221-615 |
| Cow position: | chr20:871569-871965 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 292 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 28, 243 |
| Conread position: | 221-615 |
| Cow position: | chr20:15096455-15096873 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 221-615 |
| Cow position: | chr20:27870625-27870211 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 222-506 |
| Cow position: | chr20:30429708-30429395 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 225-612 |
| Cow position: | chr20:14869529-14869945 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 225-615 |
| Cow position: | chr20:18313930-18314342 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 226-612 |
| Cow position: | chr20:37581636-37581224 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 231-560 |
| Cow position: | chr20:21916060-21915701 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 232-551 |
| Cow position: | chr20:5229092-5229431 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 232-606 |
| Cow position: | chr20:13499537-13499127 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 232-615 |
| Cow position: | chr20:10853920-10854333 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 233-612 |
| Cow position: | chr20:5466454-5466052 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 242-436 |
| Cow position: | chr20:27896617-27896824 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 247-560 |
| Cow position: | chr20:28564186-28564508 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 247-615 |
| Cow position: | chr20:13787451-13787071 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 258-565 |
| Cow position: | chr20:28480067-28479770 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 306-527 |
| Cow position: | chr20:40259633-40259415 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 307-615 |
| Cow position: | chr20:29949849-29949511 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 313-615 |
| Cow position: | chr20:30686898-30686577 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 322-615 |
| Cow position: | chr20:8973502-8973810 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 327-615 |
| Cow position: | chr20:2787836-2788141 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 199 |
| Conread position: | 332-527 |
| Cow position: | chr20:32349574-32349371 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 337-610 |
| Cow position: | chr20:19050250-19050533 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 366-615 |
| Cow position: | chr20:12437440-12437702 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 113 |
Show alignments to all cow chromosomes.