Cow genome map
Conread name: | Lym2-sn67_H09.f |
Conread position: | 210-612 |
Cow position: | chr22:6875927-6876332 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 254 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 84, 65 |
Conread position: | 216-615 |
Cow position: | chr22:559346-559761 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 16 |
Conread position: | 217-433 |
Cow position: | chr22:44368099-44368324 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 24, 119 |
Conread position: | 217-450 |
Cow position: | chr22:46585181-46585434 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 217-457 |
Cow position: | chr22:24951940-24951681 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 27, 246 |
Conread position: | 217-497 |
Cow position: | chr22:33352055-33351755 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 20, 175 |
Conread position: | 217-503 |
Cow position: | chr22:7304271-7304574 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 211 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 27, 169 |
Conread position: | 217-535 |
Cow position: | chr22:40379095-40378761 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 233 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 77, 30 |
Conread position: | 217-540 |
Cow position: | chr22:21035007-21035356 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 285 |
Conread position: | 217-552 |
Cow position: | chr22:19536936-19536574 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 249 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 27, 212 |
Conread position: | 217-553 |
Cow position: | chr22:1268370-1268741 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 269 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 33, 361 |
Conread position: | 217-556 |
Cow position: | chr22:44492438-44492069 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 258 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-557 |
Cow position: | chr22:18814982-18815350 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-557 |
Cow position: | chr22:45582298-45581941 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 253 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 23, 194 |
Conread position: | 217-560 |
Cow position: | chr22:21195114-21195480 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 255 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 27, 81 |
Conread position: | 217-560 |
Cow position: | chr22:35906008-35906369 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 308 |
Conread position: | 217-561 |
Cow position: | chr22:8120705-8121069 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 23 |
Conread position: | 217-568 |
Cow position: | chr22:13773903-13773539 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 259 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 24, 49 |
Conread position: | 217-612 |
Cow position: | chr22:538494-538053 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 305 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 27, 310 |
Conread position: | 217-612 |
Cow position: | chr22:3276974-3277407 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 299 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-612 |
Cow position: | chr22:6022047-6021615 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 298 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr22:290314-290753 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 289 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 217-615 |
Cow position: | chr22:694999-694572 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr22:1281351-1281782 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 68 |
Conread position: | 217-615 |
Cow position: | chr22:3803563-3803137 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 44 |
Conread position: | 217-615 |
Cow position: | chr22:6333096-6332659 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-615 |
Cow position: | chr22:6601862-6602259 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 217-615 |
Cow position: | chr22:10908453-10908887 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr22:11803668-11804105 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 304 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 27, 200 |
Conread position: | 217-615 |
Cow position: | chr22:12730313-12730734 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 217-615 |
Cow position: | chr22:16202296-16201877 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 282 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 27, 131 |
Conread position: | 217-615 |
Cow position: | chr22:17327075-17327506 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 217-615 |
Cow position: | chr22:20239456-20239892 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 297 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 217-615 |
Cow position: | chr22:27308395-27308826 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 217-615 |
Cow position: | chr22:31333661-31334086 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 357 |
Conread position: | 217-615 |
Cow position: | chr22:34169723-34169288 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 217-615 |
Cow position: | chr22:36185140-36184708 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 298 |
Conread position: | 217-615 |
Cow position: | chr22:36860165-36860586 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 24 |
Conread position: | 217-615 |
Cow position: | chr22:37292291-37292716 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 188 |
Conread position: | 217-615 |
Cow position: | chr22:42992559-42992125 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 217-615 |
Cow position: | chr22:44397814-44397395 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 232 |
Conread position: | 217-615 |
Cow position: | chr22:46580335-46580772 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 301 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 220-615 |
Cow position: | chr22:1519640-1520074 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 62 |
Conread position: | 220-615 |
Cow position: | chr22:6501761-6502196 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 155 |
Conread position: | 220-615 |
Cow position: | chr22:19142321-19142740 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 113 |
Conread position: | 220-615 |
Cow position: | chr22:39468155-39468571 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 87 |
Conread position: | 220-615 |
Cow position: | chr22:44935327-44934919 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 19 |
Conread position: | 221-468 |
Cow position: | chr22:38550763-38550506 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 183 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 30, 67 |
Conread position: | 221-609 |
Cow position: | chr22:95985-96388 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 264 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 16, 263 |
Conread position: | 221-610 |
Cow position: | chr22:325810-326212 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 230 |
Conread position: | 221-614 |
Cow position: | chr22:522014-522444 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 295 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 221-615 |
Cow position: | chr22:40370815-40370400 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 278 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 32, 147 |
Conread position: | 223-615 |
Cow position: | chr22:8736972-8737380 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 282 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 92, 50 |
Conread position: | 225-615 |
Cow position: | chr22:203072-202668 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 261 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 225-615 |
Cow position: | chr22:1323577-1323158 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 412 |
Conread position: | 227-431 |
Cow position: | chr22:44348485-44348705 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 161 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 13, 147 |
Conread position: | 242-588 |
Cow position: | chr22:1880158-1879784 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 265 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 37, 139 |
Conread position: | 243-608 |
Cow position: | chr22:30677361-30677727 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 267 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 145, 26 |
Conread position: | 243-615 |
Cow position: | chr22:18028641-18028231 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 296 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 36, 172 |
Conread position: | 245-612 |
Cow position: | chr22:37268518-37268113 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 272 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 257-557 |
Cow position: | chr22:283746-284056 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 219 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 22, 49 |
Conread position: | 258-559 |
Cow position: | chr22:15054043-15053732 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 216 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 64, 16 |
Conread position: | 305-615 |
Cow position: | chr22:21590611-21590287 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 18 |
Conread position: | 306-615 |
Cow position: | chr22:19320289-19319963 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 226 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 8, 17 |
Conread position: | 316-610 |
Cow position: | chr22:44477890-44477581 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 83 |
Conread position: | 325-615 |
Cow position: | chr22:9045384-9045082 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 201 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 109, 80 |
Conread position: | 331-557 |
Cow position: | chr22:37141150-37140913 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 186 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 26, 60 |
Conread position: | 344-615 |
Cow position: | chr22:37133891-37133601 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 222 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 95, 130 |
Conread position: | 347-615 |
Cow position: | chr22:11032983-11032696 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 211 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 373-615 |
Cow position: | chr22:41418115-41418365 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 179 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 62, 178 |
Conread position: | 377-615 |
Cow position: | chr22:15312746-15313002 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 188 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 390-615 |
Cow position: | chr22:46613054-46612824 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 160 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 178 |
Conread position: | 474-615 |
Cow position: | chr22:31314444-31314296 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.