Cow genome map
| Conread name: | Lym2-sn67_H09.f |
| Conread position: | 214-555 |
| Cow position: | chr23:15876187-15876550 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 217-430 |
| Cow position: | chr23:21821911-21822129 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 217-431 |
| Cow position: | chr23:2718692-2718460 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 217-433 |
| Cow position: | chr23:16055154-16054925 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 217-524 |
| Cow position: | chr23:7044802-7045130 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 217-552 |
| Cow position: | chr23:14922915-14923280 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-552 |
| Cow position: | chr23:41141848-41142211 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-559 |
| Cow position: | chr23:30237652-30237282 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 344 |
| Conread position: | 217-560 |
| Cow position: | chr23:27400906-27400533 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 217-565 |
| Cow position: | chr23:14777579-14777953 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 284 |
| Conread position: | 217-612 |
| Cow position: | chr23:29450968-29451391 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 217-615 |
| Cow position: | chr23:965115-965546 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr23:2759280-2758837 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr23:2793878-2794307 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr23:3879707-3880135 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr23:4818406-4817970 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 410 |
| Conread position: | 217-615 |
| Cow position: | chr23:4890069-4889634 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 235 |
| Conread position: | 217-615 |
| Cow position: | chr23:13510996-13510599 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 217-615 |
| Cow position: | chr23:14963671-14964097 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 206 |
| Conread position: | 217-615 |
| Cow position: | chr23:15178451-15178022 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 203 |
| Conread position: | 217-615 |
| Cow position: | chr23:16497865-16498282 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 288 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 217-615 |
| Cow position: | chr23:19949207-19949650 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr23:22145927-22146351 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 358 |
| Conread position: | 220-430 |
| Cow position: | chr23:19451525-19451297 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 220-611 |
| Cow position: | chr23:5873196-5873626 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 224 |
| Conread position: | 221-431 |
| Cow position: | chr23:14945211-14945422 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 221-554 |
| Cow position: | chr23:22168021-22167690 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 221-560 |
| Cow position: | chr23:38669509-38669851 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 32 |
| Conread position: | 221-568 |
| Cow position: | chr23:21243367-21243735 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 221-613 |
| Cow position: | chr23:15041398-15041794 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 221-615 |
| Cow position: | chr23:15526916-15526518 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 26 |
| Conread position: | 221-615 |
| Cow position: | chr23:20154851-20155269 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 222-488 |
| Cow position: | chr23:31648653-31648930 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 256 |
| Conread position: | 222-615 |
| Cow position: | chr23:2342456-2342026 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 223-560 |
| Cow position: | chr23:14972603-14972962 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 225-615 |
| Cow position: | chr23:25682599-25682991 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 233-615 |
| Cow position: | chr23:618115-618516 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 242-496 |
| Cow position: | chr23:23282582-23282304 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 41, 259 |
| Conread position: | 242-606 |
| Cow position: | chr23:1957232-1956854 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 209 |
| Conread position: | 242-615 |
| Cow position: | chr23:2025730-2026132 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 168 |
| Conread position: | 242-615 |
| Cow position: | chr23:11780133-11779733 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-615 |
| Cow position: | chr23:36030032-36030428 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 247-611 |
| Cow position: | chr23:3707474-3707075 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 281 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 257-615 |
| Cow position: | chr23:38582043-38581676 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 307-560 |
| Cow position: | chr23:26159437-26159704 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 127, 88 |
| Conread position: | 322-615 |
| Cow position: | chr23:2780708-2781017 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 322-615 |
| Cow position: | chr23:19490801-19490485 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 324-615 |
| Cow position: | chr23:28367270-28367583 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 160 |
| Conread position: | 330-615 |
| Cow position: | chr23:23171751-23171449 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 336-543 |
| Cow position: | chr23:6220499-6220281 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 348-615 |
| Cow position: | chr23:28025892-28025609 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 358-615 |
| Cow position: | chr23:27971753-27971479 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 358-615 |
| Cow position: | chr23:28108899-28108627 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 370-615 |
| Cow position: | chr23:4639417-4639675 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 77, 220 |
| Conread position: | 408-615 |
| Cow position: | chr23:8287204-8286979 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 416-615 |
| Cow position: | chr23:16614273-16614487 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 458-615 |
| Cow position: | chr23:15218787-15218953 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 474-614 |
| Cow position: | chr23:31648943-31649092 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.