Cow genome map
| Conread name: | Lym2-sn67_H09.f |
| Conread position: | 216-445 |
| Cow position: | chr27:25084953-25084716 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 217-465 |
| Cow position: | chr27:19260083-19259816 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 246 |
| Conread position: | 217-488 |
| Cow position: | chr27:4980755-4980458 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 102 |
| Conread position: | 217-528 |
| Cow position: | chr27:15274682-15275018 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 220 |
| Conread position: | 217-555 |
| Cow position: | chr27:11486683-11486333 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 217-613 |
| Cow position: | chr27:15635959-15636394 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 217-614 |
| Cow position: | chr27:26326445-26326025 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 217-615 |
| Cow position: | chr27:1210738-1210306 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 217-615 |
| Cow position: | chr27:3234170-3234590 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 217-615 |
| Cow position: | chr27:9331118-9330683 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 217-615 |
| Cow position: | chr27:13898699-13898272 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 217-615 |
| Cow position: | chr27:27664385-27663949 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 173 |
| Conread position: | 221-614 |
| Cow position: | chr27:28892976-28892548 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 163 |
| Conread position: | 221-615 |
| Cow position: | chr27:28079765-28079385 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 328, 26 |
| Conread position: | 226-430 |
| Cow position: | chr27:5912273-5912069 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 226-498 |
| Cow position: | chr27:26554037-26554322 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 226-612 |
| Cow position: | chr27:16033028-16033439 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 235-615 |
| Cow position: | chr27:9991838-9992249 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 242-542 |
| Cow position: | chr27:23292629-23292309 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 247-553 |
| Cow position: | chr27:25803341-25803661 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 319-570 |
| Cow position: | chr27:6160736-6160995 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 319-613 |
| Cow position: | chr27:8568471-8568165 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 120, 157 |
| Conread position: | 322-615 |
| Cow position: | chr27:1677323-1677620 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 109, 79 |
| Conread position: | 322-615 |
| Cow position: | chr27:14459186-14459501 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 348-552 |
| Cow position: | chr27:310770-310573 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 377-560 |
| Cow position: | chr27:27751890-27752082 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 388-561 |
| Cow position: | chr27:12748026-12747849 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 458-615 |
| Cow position: | chr27:15036478-15036640 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.