Cow genome map


           Conread name:
           Lym2-sn67_H09.f
        

               Conread position:
               214-559
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 152
               

               Conread position:
               216-615
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 108
               

               Conread position:
               216-615
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               217-437
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               217-484
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 229
               

               Conread position:
               217-519
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 168
               

               Conread position:
               217-519
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 221
               

               Conread position:
               217-530
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 273
               

               Conread position:
               217-537
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               217-540
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               217-553
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               217-557
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               217-560
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 286
               

               Conread position:
               217-595
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               217-599
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               217-606
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               217-612
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 71
               

               Conread position:
               217-613
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 224
               

               Conread position:
               217-614
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               297
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               33, 221
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 295
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 332
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 356
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 161
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               313
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               24, 207
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 245
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 177
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 187
               

               Conread position:
               217-615
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               218-556
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               220-483
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               220-615
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               221-543
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               223-615
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               225-612
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               226-612
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               226-615
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               232-522
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               233-615
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               235-530
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               239-488
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               242-449
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               242-560
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               242-615
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               242-615
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               242-615
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 42
               

               Conread position:
               243-615
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               243-615
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               249-615
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               253-560
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 141
               

               Conread position:
               276-431
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               305-549
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               306-615
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               306-615
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               307-560
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               313-613
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 9
               

               Conread position:
               313-615
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 7
               

               Conread position:
               319-612
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               322-615
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               112, 70
               

               Conread position:
               330-557
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               339-589
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               95, 253
               

               Conread position:
               344-551
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               87, 160
               

               Conread position:
               377-615
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               387-615
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               407-615
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               32, 112
               

               Conread position:
               475-615
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 30
               
Show alignments to all cow chromosomes.