Cow genome map
| Conread name: | Lym2-sn67_H09.f | 
| Conread position: | 210-615 | 
| Cow position: | chr6:17047394-17046971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 11 | 
| Conread position: | 216-615 | 
| Cow position: | chr6:35875377-35875797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 16 | 
| Conread position: | 217-437 | 
| Cow position: | chr6:65897621-65897857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 217-452 | 
| Cow position: | chr6:43792217-43792473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 217-465 | 
| Cow position: | chr6:46574132-46573865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 27, 246 | 
| Conread position: | 217-504 | 
| Cow position: | chr6:35418948-35419239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 48, 20 | 
| Conread position: | 217-521 | 
| Cow position: | chr6:40379279-40379611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 27, 284 | 
| Conread position: | 217-551 | 
| Cow position: | chr6:2877332-2877685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 27, 202 | 
| Conread position: | 217-552 | 
| Cow position: | chr6:3785122-3784757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-552 | 
| Cow position: | chr6:28187468-28187827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-553 | 
| Cow position: | chr6:26669510-26669874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 27, 202 | 
| Conread position: | 217-555 | 
| Cow position: | chr6:16053461-16053094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-557 | 
| Cow position: | chr6:7177936-7178300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 190 | 
| Conread position: | 217-559 | 
| Cow position: | chr6:7834840-7834502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 53 | 
| Conread position: | 217-560 | 
| Cow position: | chr6:1821271-1821631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 217-560 | 
| Cow position: | chr6:13316114-13316477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 205 | 
| Conread position: | 217-560 | 
| Cow position: | chr6:21974022-21973652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 217-561 | 
| Cow position: | chr6:41228793-41228427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 218 | 
| Conread position: | 217-561 | 
| Cow position: | chr6:58601833-58601464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 225 | 
| Conread position: | 217-608 | 
| Cow position: | chr6:69391171-69391586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 17, 298 | 
| Conread position: | 217-612 | 
| Cow position: | chr6:2376036-2375620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 194 | 
| Conread position: | 217-612 | 
| Cow position: | chr6:9264443-9264014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 27, 306 | 
| Conread position: | 217-612 | 
| Cow position: | chr6:45587303-45586883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 27, 238 | 
| Conread position: | 217-612 | 
| Cow position: | chr6:64717377-64716962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 24, 293 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:330112-330543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 27, 186 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:703565-703136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 153 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:914987-914548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:1381977-1382394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 27, 19 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:1535221-1535658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 354 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:3150586-3150183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 27, 110 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:3487073-3487504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 306 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:10250253-10250680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 245 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:11273556-11273994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 62, 34 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:11871303-11871727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 116 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:13105415-13104977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:13945264-13944826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 27, 203 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:15139822-15140258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:15278464-15278892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 189 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:17596957-17597391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:20559749-20560183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 12 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:27170932-27170495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:27471927-27471518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 62, 98 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:28104509-28104943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 46 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:28134261-28133849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 62, 156 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:34890771-34891205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:39333522-39333950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 30 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:39910690-39910253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:40865969-40866405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 101 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:41190650-41190238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 150 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:50645829-50646265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:51087294-51086862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 202 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:51731436-51731016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 243 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:52694378-52693935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 40, 294 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:55541904-55542346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:58028024-58027592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 30 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:58066083-58065659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 15 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:65820618-65821054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 217-615 | 
| Cow position: | chr6:66233158-66232734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 234 | 
| Conread position: | 218-528 | 
| Cow position: | chr6:15478519-15478186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 65, 12 | 
| Conread position: | 220-615 | 
| Cow position: | chr6:3276019-3276455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 142 | 
| Conread position: | 220-615 | 
| Cow position: | chr6:13848368-13847946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 19, 34 | 
| Conread position: | 220-615 | 
| Cow position: | chr6:29312834-29312421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 105 | 
| Conread position: | 220-615 | 
| Cow position: | chr6:36527636-36527219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 81 | 
| Conread position: | 221-438 | 
| Cow position: | chr6:66745341-66745109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 20, 184 | 
| Conread position: | 221-438 | 
| Cow position: | chr6:67265232-67265000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 20, 184 | 
| Conread position: | 221-560 | 
| Cow position: | chr6:40973-41332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 234 | 
| Conread position: | 221-565 | 
| Cow position: | chr6:18973065-18973426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 29, 101 | 
| Conread position: | 221-612 | 
| Cow position: | chr6:19336419-19336813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 226, 47 | 
| Conread position: | 221-615 | 
| Cow position: | chr6:10645073-10644659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 83 | 
| Conread position: | 221-615 | 
| Cow position: | chr6:24240376-24239972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 26 | 
| Conread position: | 221-615 | 
| Cow position: | chr6:25215540-25215138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 11 | 
| Conread position: | 222-615 | 
| Cow position: | chr6:10339279-10339683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 192 | 
| Conread position: | 223-557 | 
| Cow position: | chr6:48579650-48580005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 223-558 | 
| Cow position: | chr6:44262128-44262496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 60, 7 | 
| Conread position: | 223-615 | 
| Cow position: | chr6:47041870-47042282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 228 | 
| Conread position: | 225-615 | 
| Cow position: | chr6:14761575-14761987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 6, 75 | 
| Conread position: | 226-484 | 
| Cow position: | chr6:46602900-46603176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 18, 237 | 
| Conread position: | 226-612 | 
| Cow position: | chr6:40276426-40276009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 53, 21 | 
| Conread position: | 226-612 | 
| Cow position: | chr6:40326760-40326337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 18, 194 | 
| Conread position: | 227-543 | 
| Cow position: | chr6:25792419-25792758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 15 | 
| Conread position: | 230-554 | 
| Cow position: | chr6:60932022-60931673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 230-600 | 
| Cow position: | chr6:10610207-10609820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 90 | 
| Conread position: | 232-615 | 
| Cow position: | chr6:17244076-17244481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 9, 66 | 
| Conread position: | 235-612 | 
| Cow position: | chr6:21835845-21836271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 46, 18 | 
| Conread position: | 235-615 | 
| Cow position: | chr6:3888173-3888585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 235-615 | 
| Cow position: | chr6:40553243-40553657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 17 | 
| Conread position: | 241-615 | 
| Cow position: | chr6:65842939-65842544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 74 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:50281-50689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:5948457-5948858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 257 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:8759973-8760371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 270 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:27528672-27529082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 190 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:28170228-28169823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 258 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:28276331-28275927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:28490242-28490645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:30273571-30273974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 242-615 | 
| Cow position: | chr6:44149225-44149637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 37, 162 | 
| Conread position: | 243-615 | 
| Cow position: | chr6:12664994-12665400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 36, 166 | 
| Conread position: | 243-615 | 
| Cow position: | chr6:13310032-13310441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 170 | 
| Conread position: | 243-615 | 
| Cow position: | chr6:43619045-43618635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 249-457 | 
| Cow position: | chr6:2577256-2577036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 30, 95 | 
| Conread position: | 257-615 | 
| Cow position: | chr6:31636123-31636495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 300-615 | 
| Cow position: | chr6:4258512-4258828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 12, 65 | 
| Conread position: | 305-615 | 
| Cow position: | chr6:66546732-66546409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 137, 17 | 
| Conread position: | 306-465 | 
| Cow position: | chr6:32301002-32301158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 8, 17 | 
| Conread position: | 313-615 | 
| Cow position: | chr6:8203414-8203102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 9 | 
| Conread position: | 322-554 | 
| Cow position: | chr6:7140114-7140343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 322-557 | 
| Cow position: | chr6:50635184-50634935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 322-560 | 
| Cow position: | chr6:51715754-51715527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 322-614 | 
| Cow position: | chr6:44000290-43999980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 322-615 | 
| Cow position: | chr6:6567810-6567509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 117, 51 | 
| Conread position: | 329-615 | 
| Cow position: | chr6:1404364-1404667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 329-615 | 
| Cow position: | chr6:1410430-1410733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 332-551 | 
| Cow position: | chr6:8022105-8021885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 116, 74 | 
| Conread position: | 336-504 | 
| Cow position: | chr6:15926355-15926530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 95, 33 | 
| Conread position: | 340-540 | 
| Cow position: | chr6:34004082-34004285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 91, 140 | 
| Conread position: | 344-615 | 
| Cow position: | chr6:68028122-68027846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 193, 98 | 
| Conread position: | 376-615 | 
| Cow position: | chr6:38272056-38271808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 78, 59 | 
| Conread position: | 378-612 | 
| Cow position: | chr6:16635418-16635172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 401-615 | 
| Cow position: | chr6:39438915-39438684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 42, 0 | 
Show alignments to all cow chromosomes.
