Cow genome map

Conread name: Lym2-sn67_H09.f

Conread position: 202-533
Cow position: chr7:26852899-26852552 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 30

Conread position: 214-564
Cow position: chr7:57211599-57211235 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 249

Conread position: 217-402
Cow position: chr7:40320623-40320432 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 33

Conread position: 217-433
Cow position: chr7:55041044-55041281 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 217-440
Cow position: chr7:49828891-49829126 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 217-452
Cow position: chr7:996188-995947 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 125

Conread position: 217-551
Cow position: chr7:5664010-5663645 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 29, 204

Conread position: 217-554
Cow position: chr7:20211631-20211986 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 151

Conread position: 217-555
Cow position: chr7:21311893-21311531 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 337

Conread position: 217-555
Cow position: chr7:40268535-40268888 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 104, 57

Conread position: 217-559
Cow position: chr7:57563658-57564023 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 24, 133

Conread position: 217-561
Cow position: chr7:24934111-24934448 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 33, 110

Conread position: 217-591
Cow position: chr7:24058881-24058487 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 70

Conread position: 217-606
Cow position: chr7:54785955-54786364 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 61

Conread position: 217-608
Cow position: chr7:39554054-39554458 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 55

Conread position: 217-611
Cow position: chr7:20798004-20798428 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 217-612
Cow position: chr7:5261474-5261912 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 40

Conread position: 217-612
Cow position: chr7:20773891-20774319 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-613
Cow position: chr7:24807040-24807445 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 330

Conread position: 217-615
Cow position: chr7:526411-525986 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 131

Conread position: 217-615
Cow position: chr7:546289-545854 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 217-615
Cow position: chr7:1453088-1452656 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 217-615
Cow position: chr7:3156914-3156479 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 217-615
Cow position: chr7:3299726-3300146 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 235

Conread position: 217-615
Cow position: chr7:6629856-6630291 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 27, 146

Conread position: 217-615
Cow position: chr7:6721583-6721154 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 177

Conread position: 217-615
Cow position: chr7:13532471-13532893 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 30

Conread position: 217-615
Cow position: chr7:19990460-19990038 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 176

Conread position: 217-615
Cow position: chr7:20514344-20514766 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 177

Conread position: 217-615
Cow position: chr7:21126225-21126652 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 103

Conread position: 217-615
Cow position: chr7:21233562-21234000 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr7:21986846-21986436 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 217-615
Cow position: chr7:25440946-25440513 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 161

Conread position: 217-615
Cow position: chr7:27100847-27101285 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr7:33311504-33311940 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 154

Conread position: 217-615
Cow position: chr7:33333003-33332570 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 32

Conread position: 217-615
Cow position: chr7:34487355-34486926 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 217-615
Cow position: chr7:38398261-38397825 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 161

Conread position: 217-615
Cow position: chr7:42871588-42871151 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 360

Conread position: 217-615
Cow position: chr7:45947706-45948134 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 217-615
Cow position: chr7:48635863-48635435 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 217-615
Cow position: chr7:51015701-51015275 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 217-615
Cow position: chr7:52763728-52763288 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 217-615
Cow position: chr7:58995016-58994603 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 217-615
Cow position: chr7:59680291-59679857 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 62, 75

Conread position: 217-615
Cow position: chr7:64239580-64239993 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 217-615
Cow position: chr7:65812266-65811843 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 287
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 201

Conread position: 217-615
Cow position: chr7:66906169-66905730 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 217-615
Cow position: chr7:67800269-67799835 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 182

Conread position: 220-555
Cow position: chr7:25136287-25135941 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 60

Conread position: 220-615
Cow position: chr7:14138155-14138586 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 220-615
Cow position: chr7:29471901-29471469 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 324

Conread position: 220-615
Cow position: chr7:67430008-67429581 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 275

Conread position: 221-410
Cow position: chr7:541533-541732 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 45

Conread position: 221-553
Cow position: chr7:45915801-45915461 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 16

Conread position: 221-558
Cow position: chr7:63387150-63386808 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 93, 26

Conread position: 221-615
Cow position: chr7:10429989-10430413 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 221-615
Cow position: chr7:14213930-14214355 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 221-615
Cow position: chr7:24878444-24878868 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 280

Conread position: 221-615
Cow position: chr7:67676519-67676106 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 165

Conread position: 222-612
Cow position: chr7:1371225-1371633 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 222-615
Cow position: chr7:67495542-67495119 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 125

Conread position: 223-565
Cow position: chr7:27605882-27606240 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 13

Conread position: 224-530
Cow position: chr7:63949622-63949936 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 169

Conread position: 225-554
Cow position: chr7:29368599-29368943 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 227-442
Cow position: chr7:3124900-3124667 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 220

Conread position: 230-605
Cow position: chr7:68334345-68333964 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 12

Conread position: 230-615
Cow position: chr7:67490116-67489717 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 31

Conread position: 232-422
Cow position: chr7:27788369-27788170 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 165

Conread position: 242-494
Cow position: chr7:54649313-54649047 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 217

Conread position: 242-504
Cow position: chr7:20060900-20060612 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 242-526
Cow position: chr7:26460707-26460416 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 215

Conread position: 242-613
Cow position: chr7:5308699-5309101 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 131

Conread position: 242-615
Cow position: chr7:46900654-46901070 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 242-615
Cow position: chr7:55536514-55536914 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 19

Conread position: 243-612
Cow position: chr7:11447982-11447572 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 244-615
Cow position: chr7:6647257-6647647 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 94

Conread position: 248-615
Cow position: chr7:59139042-59138667 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 36

Conread position: 249-615
Cow position: chr7:39097116-39097497 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 41

Conread position: 251-615
Cow position: chr7:25251550-25251155 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 67

Conread position: 276-612
Cow position: chr7:21313340-21312995 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 14, 46

Conread position: 284-465
Cow position: chr7:54603698-54603523 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 312-615
Cow position: chr7:11462719-11463035 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 127, 0

Conread position: 322-512
Cow position: chr7:58338068-58338270 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 103

Conread position: 322-554
Cow position: chr7:23837892-23837651 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 11

Conread position: 322-603
Cow position: chr7:30118218-30118512 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 342-539
Cow position: chr7:54670752-54670960 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 344-534
Cow position: chr7:27583426-27583625 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 348-615
Cow position: chr7:39793063-39792780 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 353-615
Cow position: chr7:53364459-53364730 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 22

Conread position: 365-615
Cow position: chr7:52803413-52803658 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 63

Conread position: 378-615
Cow position: chr7:59466707-59466952 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 65

Conread position: 389-615
Cow position: chr7:21930390-21930149 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 402-615
Cow position: chr7:34150543-34150314 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 428-615
Cow position: chr7:49829421-49829616 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 9

Conread position: 437-615
Cow position: chr7:27787824-27787641 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 7

Conread position: 459-615
Cow position: chr7:8144061-8144223 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 14

Show alignments to all cow chromosomes.