Cow genome map
| Conread name: | Lym2-sn67_H09.f |
| Conread position: | 214-615 |
| Cow position: | chrX:5282593-5283014 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 214-615 |
| Cow position: | chrX:17477236-17477670 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 214-615 |
| Cow position: | chrX:24324373-24324819 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 216-555 |
| Cow position: | chrX:26999758-26999407 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 217-431 |
| Cow position: | chrX:5356636-5356868 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-461 |
| Cow position: | chrX:28521412-28521669 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 253 |
| Conread position: | 217-465 |
| Cow position: | chrX:18452169-18451902 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 27, 246 |
| Conread position: | 217-465 |
| Cow position: | chrX:20695642-20695895 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 217-488 |
| Cow position: | chrX:27495861-27495570 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 217-498 |
| Cow position: | chrX:2815294-2815602 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-500 |
| Cow position: | chrX:21341582-21341269 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-504 |
| Cow position: | chrX:21643714-21644020 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 247 |
| Conread position: | 217-506 |
| Cow position: | chrX:15600336-15600032 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 217-534 |
| Cow position: | chrX:5651465-5651788 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 217-540 |
| Cow position: | chrX:30068661-30069008 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 217-552 |
| Cow position: | chrX:37015312-37014948 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 217-553 |
| Cow position: | chrX:18535606-18535277 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 24 |
| Conread position: | 217-553 |
| Cow position: | chrX:36136377-36136728 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 204 |
| Conread position: | 217-554 |
| Cow position: | chrX:8610515-8610876 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 275 |
| Conread position: | 217-555 |
| Cow position: | chrX:16463128-16463493 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 202 |
| Conread position: | 217-556 |
| Cow position: | chrX:20798499-20798142 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 156 |
| Conread position: | 217-557 |
| Cow position: | chrX:21268861-21269235 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 217-560 |
| Cow position: | chrX:3420022-3420382 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 217-560 |
| Cow position: | chrX:9093766-9093392 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-560 |
| Cow position: | chrX:21590176-21589809 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 217-560 |
| Cow position: | chrX:28626442-28626809 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 176 |
| Conread position: | 217-560 |
| Cow position: | chrX:31199745-31199379 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-565 |
| Cow position: | chrX:6281595-6281943 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 217-565 |
| Cow position: | chrX:17052733-17052356 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 284 |
| Conread position: | 217-565 |
| Cow position: | chrX:39562761-39563120 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 217-568 |
| Cow position: | chrX:9009526-9009150 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 27, 199 |
| Conread position: | 217-577 |
| Cow position: | chrX:18220616-18220222 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-607 |
| Cow position: | chrX:29910240-29910662 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 217-611 |
| Cow position: | chrX:30058240-30057811 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 217-612 |
| Cow position: | chrX:8589351-8588921 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 153 |
| Conread position: | 217-612 |
| Cow position: | chrX:12354425-12353999 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-612 |
| Cow position: | chrX:13054202-13053765 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 217-612 |
| Cow position: | chrX:13397029-13397461 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 287 |
| Conread position: | 217-612 |
| Cow position: | chrX:29886180-29885744 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 217-612 |
| Cow position: | chrX:30201549-30201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-614 |
| Cow position: | chrX:11148146-11148580 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:674016-674450 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 298 |
| Conread position: | 217-615 |
| Cow position: | chrX:971960-971530 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:983854-983417 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:1548168-1547728 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 217-615 |
| Cow position: | chrX:2858188-2858620 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 27, 320 |
| Conread position: | 217-615 |
| Cow position: | chrX:3374720-3375151 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 298 |
| Conread position: | 217-615 |
| Cow position: | chrX:4797475-4797079 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 217-615 |
| Cow position: | chrX:5322539-5322971 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 217-615 |
| Cow position: | chrX:6871885-6872318 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 197 |
| Conread position: | 217-615 |
| Cow position: | chrX:7031653-7031218 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:8574307-8574723 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 217-615 |
| Cow position: | chrX:8962384-8962821 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 27, 354 |
| Conread position: | 217-615 |
| Cow position: | chrX:12314570-12315001 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 217-615 |
| Cow position: | chrX:13411950-13412377 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 217-615 |
| Cow position: | chrX:14596035-14595600 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 308 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 217-615 |
| Cow position: | chrX:15126038-15126481 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 217-615 |
| Cow position: | chrX:15486591-15486995 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 217-615 |
| Cow position: | chrX:15623312-15623743 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 301 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 27, 353 |
| Conread position: | 217-615 |
| Cow position: | chrX:16276838-16276401 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:16361932-16362369 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 188 |
| Conread position: | 217-615 |
| Cow position: | chrX:17666605-17667028 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 217-615 |
| Cow position: | chrX:18658620-18659033 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 217-615 |
| Cow position: | chrX:21830707-21830283 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 217-615 |
| Cow position: | chrX:23020488-23020084 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 217-615 |
| Cow position: | chrX:23039938-23040368 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 217-615 |
| Cow position: | chrX:23454830-23455262 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 318 |
| Conread position: | 217-615 |
| Cow position: | chrX:24134079-24134497 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 217-615 |
| Cow position: | chrX:26529156-26528730 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 217-615 |
| Cow position: | chrX:26766011-26766455 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:27316466-27316029 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:27425134-27425571 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:27592798-27593235 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 154 |
| Conread position: | 217-615 |
| Cow position: | chrX:27962037-27961610 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 217-615 |
| Cow position: | chrX:28554792-28554365 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 217-615 |
| Cow position: | chrX:28560707-28561134 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 217-615 |
| Cow position: | chrX:29097387-29096950 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:29172572-29173008 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:29286619-29286185 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:29792843-29793279 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:30012187-30011753 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:30230910-30231342 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 217-615 |
| Cow position: | chrX:30365610-30366027 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 217-615 |
| Cow position: | chrX:37813340-37812917 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 27, 243 |
| Conread position: | 217-615 |
| Cow position: | chrX:38148786-38148345 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chrX:44388948-44388524 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 209 |
| Conread position: | 218-615 |
| Cow position: | chrX:29852397-29852810 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 108 |
| Conread position: | 220-560 |
| Cow position: | chrX:22817023-22816677 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 30, 182 |
| Conread position: | 220-565 |
| Cow position: | chrX:30138389-30138764 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 211 |
| Conread position: | 220-614 |
| Cow position: | chrX:6013775-6014170 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 220-615 |
| Cow position: | chrX:321633-321220 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 220-615 |
| Cow position: | chrX:16811261-16811688 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 220-615 |
| Cow position: | chrX:18952513-18952926 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 220-615 |
| Cow position: | chrX:23389333-23389762 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 221-462 |
| Cow position: | chrX:27084152-27083893 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 221-551 |
| Cow position: | chrX:31053514-31053838 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 221-560 |
| Cow position: | chrX:29949413-29949781 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 340 |
| Conread position: | 221-615 |
| Cow position: | chrX:5296371-5296794 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 221-615 |
| Cow position: | chrX:21491315-21490918 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 221-615 |
| Cow position: | chrX:34219486-34219065 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 223-612 |
| Cow position: | chrX:2561699-2562101 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 224-615 |
| Cow position: | chrX:12344097-12343690 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 224-615 |
| Cow position: | chrX:21580618-21580220 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 225-438 |
| Cow position: | chrX:43072948-43072739 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 225-615 |
| Cow position: | chrX:15178254-15178670 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 195 |
| Conread position: | 226-557 |
| Cow position: | chrX:7094583-7094235 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 226-612 |
| Cow position: | chrX:12702524-12702946 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 26, 189 |
| Conread position: | 226-613 |
| Cow position: | chrX:2481451-2481873 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 226-615 |
| Cow position: | chrX:13075516-13075942 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 229-615 |
| Cow position: | chrX:23278197-23277781 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 230-615 |
| Cow position: | chrX:29944929-29944531 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 232-540 |
| Cow position: | chrX:28868072-28868407 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 304 |
| Conread position: | 241-615 |
| Cow position: | chrX:4411797-4411410 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 241-615 |
| Cow position: | chrX:15591140-15590735 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 242-615 |
| Cow position: | chrX:3083978-3084371 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 242-615 |
| Cow position: | chrX:5864555-5864149 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 313 |
| Conread position: | 242-615 |
| Cow position: | chrX:7482793-7482388 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 37, 311 |
| Conread position: | 242-615 |
| Cow position: | chrX:7753061-7752656 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 242-615 |
| Cow position: | chrX:8480812-8480404 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 288 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-615 |
| Cow position: | chrX:9126522-9126115 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-615 |
| Cow position: | chrX:12287242-12287649 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 242-615 |
| Cow position: | chrX:15979798-15980204 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 242-615 |
| Cow position: | chrX:28586141-28585734 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-615 |
| Cow position: | chrX:32066008-32066410 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 37, 251 |
| Conread position: | 243-452 |
| Cow position: | chrX:2534912-2535135 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 243-612 |
| Cow position: | chrX:14784314-14784706 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 243-615 |
| Cow position: | chrX:1834972-1834574 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 146 |
| Conread position: | 243-615 |
| Cow position: | chrX:2577583-2577176 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 289 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 36, 167 |
| Conread position: | 243-615 |
| Cow position: | chrX:3467486-3467881 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 36, 173 |
| Conread position: | 243-615 |
| Cow position: | chrX:27618973-27619386 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 243-615 |
| Cow position: | chrX:35531013-35530618 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 135 |
| Conread position: | 244-615 |
| Cow position: | chrX:21059931-21059536 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 247-555 |
| Cow position: | chrX:26426426-26426745 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 35, 214 |
| Conread position: | 247-612 |
| Cow position: | chrX:12668593-12668991 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 322 |
| Conread position: | 247-615 |
| Cow position: | chrX:10416300-10416703 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 249-612 |
| Cow position: | chrX:22618155-22618540 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 210 |
| Conread position: | 253-615 |
| Cow position: | chrX:26757468-26757860 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 257-554 |
| Cow position: | chrX:41102331-41102642 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 270-615 |
| Cow position: | chrX:22489259-22488900 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 274-609 |
| Cow position: | chrX:2011589-2011936 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 277-612 |
| Cow position: | chrX:23133088-23132732 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 281 |
| Conread position: | 306-495 |
| Cow position: | chrX:48367964-48368150 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 306-554 |
| Cow position: | chrX:37850069-37849826 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 306-612 |
| Cow position: | chrX:11422950-11422628 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 306-615 |
| Cow position: | chrX:5335405-5335731 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 306-615 |
| Cow position: | chrX:12653444-12653771 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 307-551 |
| Cow position: | chrX:17612945-17613199 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 307-561 |
| Cow position: | chrX:16041109-16041376 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 128, 248 |
| Conread position: | 307-615 |
| Cow position: | chrX:18553509-18553184 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 313-413 |
| Cow position: | chrX:30820642-30820543 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 313-552 |
| Cow position: | chrX:16700390-16700143 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 322-556 |
| Cow position: | chrX:13416368-13416612 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 322-557 |
| Cow position: | chrX:30182875-30183116 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 322-611 |
| Cow position: | chrX:45377041-45377347 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 322-612 |
| Cow position: | chrX:10745092-10745394 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 322-614 |
| Cow position: | chrX:12461876-12461572 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 158 |
| Conread position: | 322-615 |
| Cow position: | chrX:979660-979350 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 322-615 |
| Cow position: | chrX:5393941-5394255 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 322-615 |
| Cow position: | chrX:14460588-14460278 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 325-491 |
| Cow position: | chrX:26773473-26773648 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 336-560 |
| Cow position: | chrX:16015372-16015602 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 341-615 |
| Cow position: | chrX:2103230-2102940 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 344-615 |
| Cow position: | chrX:6241562-6241852 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 366-490 |
| Cow position: | chrX:23059348-23059223 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 369-615 |
| Cow position: | chrX:29996192-29996446 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.