Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 375-620 |
| Cow position: | chr1:67299691-67299453 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 379-510 |
| Cow position: | chr1:43447928-43448055 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 379-525 |
| Cow position: | chr1:63905568-63905720 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 379-530 |
| Cow position: | chr1:47233575-47233726 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 379-531 |
| Cow position: | chr1:61246255-61246403 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 379-540 |
| Cow position: | chr1:84116302-84116141 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 379-573 |
| Cow position: | chr1:98380669-98380872 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 379-593 |
| Cow position: | chr1:53613292-53613512 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 379-615 |
| Cow position: | chr1:23634000-23634234 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 379-617 |
| Cow position: | chr1:11913973-11914211 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 379-620 |
| Cow position: | chr1:53374335-53374092 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 379-621 |
| Cow position: | chr1:84240796-84240567 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 380-620 |
| Cow position: | chr1:67821308-67821560 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 380-621 |
| Cow position: | chr1:69695099-69695349 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 132 |
| Conread position: | 381-529 |
| Cow position: | chr1:77891710-77891563 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 381-621 |
| Cow position: | chr1:75443515-75443768 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 195 |
| Conread position: | 387-621 |
| Cow position: | chr1:70828799-70828563 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 51 |
| Conread position: | 388-597 |
| Cow position: | chr1:52563900-52564106 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 389-530 |
| Cow position: | chr1:74084302-74084440 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 389-545 |
| Cow position: | chr1:39182926-39183083 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 391-616 |
| Cow position: | chr1:91066260-91066486 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 418-621 |
| Cow position: | chr1:6046371-6046171 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 25 |
Show alignments to all cow chromosomes.