Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 366-621 |
| Cow position: | chr17:5041725-5041991 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 374-617 |
| Cow position: | chr17:20083571-20083817 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 375-541 |
| Cow position: | chr17:15354925-15354758 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 376-621 |
| Cow position: | chr17:20358817-20358569 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 379-540 |
| Cow position: | chr17:17410229-17410071 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 379-615 |
| Cow position: | chr17:5898585-5898829 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 380-621 |
| Cow position: | chr17:32138478-32138706 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 186, 16 |
| Conread position: | 382-621 |
| Cow position: | chr17:33271751-33271982 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 384-616 |
| Cow position: | chr17:3387216-3386993 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 387-541 |
| Cow position: | chr17:36533588-36533433 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 387-621 |
| Cow position: | chr17:30539321-30539558 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 388-604 |
| Cow position: | chr17:16869347-16869569 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 389-617 |
| Cow position: | chr17:20129595-20129374 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 26 |
| Conread position: | 389-621 |
| Cow position: | chr17:15299947-15300173 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 390-539 |
| Cow position: | chr17:20055597-20055444 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 390-610 |
| Cow position: | chr17:21312882-21313113 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 392-540 |
| Cow position: | chr17:5423144-5423298 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 392-621 |
| Cow position: | chr17:5695019-5695251 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 39, 120 |
| Conread position: | 393-584 |
| Cow position: | chr17:22081975-22082164 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 149, 97 |
Show alignments to all cow chromosomes.