Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 335-520 |
| Cow position: | chr21:37345095-37345286 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 375-530 |
| Cow position: | chr21:42841632-42841785 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 375-621 |
| Cow position: | chr21:5595629-5595378 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 119 |
| Conread position: | 378-608 |
| Cow position: | chr21:42501000-42500758 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 378-621 |
| Cow position: | chr21:4281909-4282150 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 160 |
| Conread position: | 379-513 |
| Cow position: | chr21:18790598-18790733 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 379-527 |
| Cow position: | chr21:5426902-5426755 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 127 |
| Conread position: | 379-613 |
| Cow position: | chr21:17511739-17511501 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 194 |
| Conread position: | 379-617 |
| Cow position: | chr21:33419760-33419998 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 379-618 |
| Cow position: | chr21:38692147-38691910 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 379-621 |
| Cow position: | chr21:14760535-14760299 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 34 |
| Conread position: | 379-621 |
| Cow position: | chr21:32237256-32237014 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 380-621 |
| Cow position: | chr21:5153578-5153331 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 181 |
| Conread position: | 381-616 |
| Cow position: | chr21:23499862-23500102 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 124 |
| Conread position: | 382-617 |
| Cow position: | chr21:15584460-15584681 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 387-616 |
| Cow position: | chr21:1529277-1529509 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 387-617 |
| Cow position: | chr21:13159485-13159248 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 387-621 |
| Cow position: | chr21:937988-937766 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 389-621 |
| Cow position: | chr21:35822940-35823176 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 392-617 |
| Cow position: | chr21:36642855-36642625 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 393-534 |
| Cow position: | chr21:3361064-3361212 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 393-621 |
| Cow position: | chr21:34391027-34391252 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 107 |
Show alignments to all cow chromosomes.