Cow genome map


           Conread name:
           Lym2-sn77_C01.f1
        

               Conread position:
               374-547
               

               Cow position:
               chr23:36309325-36309154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               379-540
               

               Cow position:
               chr23:8063455-8063287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               379-608
               

               Cow position:
               chr23:29471224-29471449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               379-615
               

               Cow position:
               chr23:33601628-33601862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 137
               

               Conread position:
               379-621
               

               Cow position:
               chr23:2501954-2502212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               380-621
               

               Cow position:
               chr23:1254578-1254323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               381-621
               

               Cow position:
               chr23:13599243-13599006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               387-616
               

               Cow position:
               chr23:406275-406500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 26
               

               Conread position:
               389-525
               

               Cow position:
               chr23:26795019-26795155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               389-609
               

               Cow position:
               chr23:7402592-7402370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               389-617
               

               Cow position:
               chr23:36129013-36129243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               390-621
               

               Cow position:
               chr23:31395041-31395277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 178
               
Show alignments to all cow chromosomes.