Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 337-612 |
| Cow position: | chr3:58968987-58969252 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 365-536 |
| Cow position: | chr3:7466853-7467022 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 375-528 |
| Cow position: | chr3:49731764-49731916 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 379-531 |
| Cow position: | chr3:17957339-17957185 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 379-566 |
| Cow position: | chr3:70333606-70333790 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 379-617 |
| Cow position: | chr3:72168843-72169089 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 180 |
| Conread position: | 379-621 |
| Cow position: | chr3:8147794-8148035 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 379-621 |
| Cow position: | chr3:66609969-66610211 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 382-617 |
| Cow position: | chr3:22872180-22872421 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 386-621 |
| Cow position: | chr3:2008132-2007901 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 387-620 |
| Cow position: | chr3:80081956-80082189 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 103 |
| Conread position: | 387-621 |
| Cow position: | chr3:45214773-45215007 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 389-621 |
| Cow position: | chr3:7678532-7678294 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 390-531 |
| Cow position: | chr3:13329914-13330054 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 390-617 |
| Cow position: | chr3:60389499-60389276 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 391-619 |
| Cow position: | chr3:33633027-33633257 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 392-620 |
| Cow position: | chr3:20746720-20746952 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 392-621 |
| Cow position: | chr3:12670832-12671068 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 393-621 |
| Cow position: | chr3:80740429-80740218 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 399-556 |
| Cow position: | chr3:2851247-2851397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
Show alignments to all cow chromosomes.