Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 379-525 |
| Cow position: | chr5:51490835-51490981 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 379-528 |
| Cow position: | chr5:36868663-36868515 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 379-531 |
| Cow position: | chr5:42744711-42744564 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 379-539 |
| Cow position: | chr5:11668262-11668419 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 379-547 |
| Cow position: | chr5:65588626-65588463 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 379-606 |
| Cow position: | chr5:16509019-16508787 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 379-619 |
| Cow position: | chr5:4218797-4218559 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 379-621 |
| Cow position: | chr5:37377791-37377544 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 17 |
| Conread position: | 381-609 |
| Cow position: | chr5:4797395-4797625 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 387-576 |
| Cow position: | chr5:12351872-12352061 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 387-620 |
| Cow position: | chr5:47317055-47317291 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 387-621 |
| Cow position: | chr5:37190179-37190417 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 389-610 |
| Cow position: | chr5:40831224-40831000 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 389-621 |
| Cow position: | chr5:23856252-23856487 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 389-621 |
| Cow position: | chr5:56467611-56467381 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 391-617 |
| Cow position: | chr5:24349019-24348801 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 393-593 |
| Cow position: | chr5:70050665-70050457 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 157 |
| Conread position: | 396-616 |
| Cow position: | chr5:15462616-15462406 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 396-617 |
| Cow position: | chr5:42845699-42845920 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
Show alignments to all cow chromosomes.