Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 335-617 |
| Cow position: | chr6:33302389-33302105 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 364-610 |
| Cow position: | chr6:61162662-61162416 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 369-614 |
| Cow position: | chr6:23003464-23003704 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 374-621 |
| Cow position: | chr6:18049086-18049335 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 378-621 |
| Cow position: | chr6:46161590-46161834 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 379-505 |
| Cow position: | chr6:53519686-53519816 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 379-520 |
| Cow position: | chr6:54864733-54864874 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 379-533 |
| Cow position: | chr6:55936041-55936197 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 379-535 |
| Cow position: | chr6:37149125-37148974 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 148, 44 |
| Conread position: | 379-592 |
| Cow position: | chr6:21534993-21534778 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 379-616 |
| Cow position: | chr6:16706940-16706705 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 379-617 |
| Cow position: | chr6:42565626-42565380 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 379-621 |
| Cow position: | chr6:40774415-40774680 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 381-529 |
| Cow position: | chr6:60442355-60442202 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 384-565 |
| Cow position: | chr6:2423673-2423496 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 386-614 |
| Cow position: | chr6:180432-180666 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 387-621 |
| Cow position: | chr6:16765467-16765702 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 388-537 |
| Cow position: | chr6:59015632-59015787 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 389-621 |
| Cow position: | chr6:36470640-36470875 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 390-621 |
| Cow position: | chr6:20230904-20231135 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 392-524 |
| Cow position: | chr6:57405205-57405336 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 396-621 |
| Cow position: | chr6:5302488-5302709 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 28 |
Show alignments to all cow chromosomes.