Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 374-545 |
| Cow position: | chr9:34689474-34689309 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 169, 6 |
| Conread position: | 376-585 |
| Cow position: | chr9:3924749-3924961 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 379-537 |
| Cow position: | chr9:5327387-5327545 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 379-544 |
| Cow position: | chr9:13802035-13802195 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 158, 33 |
| Conread position: | 379-549 |
| Cow position: | chr9:10010933-10011108 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 379-564 |
| Cow position: | chr9:20321974-20321792 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 379-617 |
| Cow position: | chr9:16300435-16300193 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 379-621 |
| Cow position: | chr9:18008732-18008494 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 159 |
| Conread position: | 380-614 |
| Cow position: | chr9:41789416-41789659 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 380-617 |
| Cow position: | chr9:17411048-17410814 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 381-610 |
| Cow position: | chr9:1950050-1950290 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 381-617 |
| Cow position: | chr9:38961302-38961062 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 382-542 |
| Cow position: | chr9:34275423-34275254 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 387-617 |
| Cow position: | chr9:28747385-28747150 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 167 |
| Conread position: | 389-488 |
| Cow position: | chr9:50139426-50139526 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 389-566 |
| Cow position: | chr9:20318932-20318758 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 389-601 |
| Cow position: | chr9:43871119-43871331 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 390-618 |
| Cow position: | chr9:35369019-35369256 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 390-621 |
| Cow position: | chr9:5071463-5071235 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 391-620 |
| Cow position: | chr9:824103-824333 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 392-565 |
| Cow position: | chr9:29034887-29034706 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 396-621 |
| Cow position: | chr9:51566334-51566122 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 417-520 |
| Cow position: | chr9:35832423-35832522 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.