Cow genome map
| Conread name: | Lym2-sn77_C01.f1 |
| Conread position: | 37-190 |
| Cow position: | chrX:26474942-26474789 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 137 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-559 |
| Cow position: | chrX:20752220-20752003 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 364-621 |
| Cow position: | chrX:7382262-7382001 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 375-500 |
| Cow position: | chrX:1499594-1499468 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 378-612 |
| Cow position: | chrX:19188863-19188622 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 379-522 |
| Cow position: | chrX:6488501-6488363 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 379-526 |
| Cow position: | chrX:48684301-48684450 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 379-617 |
| Cow position: | chrX:6234528-6234753 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 132 |
| Conread position: | 379-617 |
| Cow position: | chrX:37489652-37489399 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 379-621 |
| Cow position: | chrX:7646180-7645935 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 379-621 |
| Cow position: | chrX:12309461-12309711 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 379-621 |
| Cow position: | chrX:12437328-12437558 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 186, 17 |
| Conread position: | 379-621 |
| Cow position: | chrX:41743836-41743590 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 381-621 |
| Cow position: | chrX:7277843-7277605 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 381-621 |
| Cow position: | chrX:10916671-10916431 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 384-617 |
| Cow position: | chrX:11581861-11581616 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 201 |
| Conread position: | 384-621 |
| Cow position: | chrX:34839858-34840090 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 113 |
| Conread position: | 387-519 |
| Cow position: | chrX:37574768-37574636 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 388-533 |
| Cow position: | chrX:25411755-25411606 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 389-567 |
| Cow position: | chrX:25815985-25816166 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 391-515 |
| Cow position: | chrX:41560331-41560455 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 391-535 |
| Cow position: | chrX:27394106-27394250 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 396-621 |
| Cow position: | chrX:4123739-4123512 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 418-621 |
| Cow position: | chrX:12096367-12096570 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 86 |
Show alignments to all cow chromosomes.