Cow genome map

Conread name: Lym2-sn78_G06.f

Conread position: 1-511
Cow position: chr10:29847000-29846485 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 1-532
Cow position: chr10:60489273-60489801 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 106

Conread position: 4-201
Cow position: chr10:14951332-14951526 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 8

Conread position: 4-321
Cow position: chr10:34318648-34318333 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 109

Conread position: 4-417
Cow position: chr10:31523472-31523855 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 24

Conread position: 4-543
Cow position: chr10:42747708-42748246 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 110

Conread position: 4-559
Cow position: chr10:4499322-4499855 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 4-567
Cow position: chr10:42109339-42109905 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 4-573
Cow position: chr10:3543963-3543395 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 101

Conread position: 4-576
Cow position: chr10:19511218-19511797 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 101

Conread position: 4-576
Cow position: chr10:24299242-24298663 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 4-576
Cow position: chr10:32063761-32064340 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 4-576
Cow position: chr10:62409238-62408666 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 29

Conread position: 6-576
Cow position: chr10:38846987-38847549 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 63

Conread position: 6-576
Cow position: chr10:46191000-46191549 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 8-574
Cow position: chr10:29695866-29696424 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 32

Conread position: 9-551
Cow position: chr10:21075985-21076529 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 23

Conread position: 9-576
Cow position: chr10:41566722-41567294 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 10-357
Cow position: chr10:54967522-54967173 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 143

Conread position: 10-576
Cow position: chr10:14859595-14860157 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 16-360
Cow position: chr10:58596131-58596473 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 14, 27

Conread position: 18-576
Cow position: chr10:276216-276780 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 93

Conread position: 18-576
Cow position: chr10:34685523-34686084 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 18-576
Cow position: chr10:62777969-62778538 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 19-576
Cow position: chr10:28116810-28116245 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 19-576
Cow position: chr10:41352130-41351569 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 201

Conread position: 23-574
Cow position: chr10:7283051-7282498 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 14

Conread position: 23-574
Cow position: chr10:38546584-38546036 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 19

Conread position: 36-259
Cow position: chr10:15862646-15862428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 38

Conread position: 37-245
Cow position: chr10:21466900-21467112 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 73

Conread position: 37-246
Cow position: chr10:19715399-19715188 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 47

Conread position: 37-436
Cow position: chr10:37060575-37060973 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-481
Cow position: chr10:57990319-57989872 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-567
Cow position: chr10:57559902-57559368 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 71

Conread position: 37-574
Cow position: chr10:38345718-38345173 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position: chr10:123963-124501 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 67

Conread position: 37-576
Cow position: chr10:280975-280430 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position: chr10:1375182-1375722 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 37-576
Cow position: chr10:4192568-4192042 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position: chr10:8289615-8290173 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-576
Cow position: chr10:11686015-11685480 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 71

Conread position: 37-576
Cow position: chr10:14803480-14804027 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 68

Conread position: 37-576
Cow position: chr10:19143693-19143147 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position: chr10:21401022-21400480 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 71

Conread position: 37-576
Cow position: chr10:21486561-21487106 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position: chr10:21741103-21740561 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 37-576
Cow position: chr10:22100886-22101423 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-576
Cow position: chr10:25565594-25565067 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 71

Conread position: 37-576
Cow position: chr10:32577946-32578480 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 37-576
Cow position: chr10:32650386-32650924 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 63

Conread position: 37-576
Cow position: chr10:37769467-37770012 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position: chr10:38538845-38538306 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 67

Conread position: 37-576
Cow position: chr10:39179438-39179974 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 71

Conread position: 37-576
Cow position: chr10:39817700-39817172 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 73

Conread position: 37-576
Cow position: chr10:41157101-41157638 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 71

Conread position: 37-576
Cow position: chr10:41876568-41877110 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 55

Conread position: 37-576
Cow position: chr10:47906427-47906969 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 37-576
Cow position: chr10:51952957-51952427 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position: chr10:54059702-54059165 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 40-574
Cow position: chr10:39041657-39041113 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 43-576
Cow position: chr10:29633209-29632672 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 90

Conread position: 44-315
Cow position: chr10:49310192-49310466 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 42

Conread position: 45-372
Cow position: chr10:53363648-53363961 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 57

Conread position: 47-382
Cow position: chr10:55092764-55093107 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 47-405
Cow position: chr10:10581327-10581691 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 302

Conread position: 48-307
Cow position: chr10:20537082-20537338 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 201, 54

Conread position: 49-576
Cow position: chr10:10478473-10477950 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 55

Conread position: 49-576
Cow position: chr10:25498012-25498543 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 49-576
Cow position: chr10:62216264-62216797 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 50-576
Cow position: chr10:25359060-25359590 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 52

Conread position: 53-417
Cow position: chr10:8328631-8328294 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 231, 51

Conread position: 57-574
Cow position: chr10:21901517-21901013 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 344
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 204, 52

Conread position: 63-378
Cow position: chr10:61297005-61297319 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 66-442
Cow position: chr10:42628349-42628716 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 38

Conread position: 68-576
Cow position: chr10:24978459-24977948 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 39

Conread position: 72-544
Cow position: chr10:42683116-42683555 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 318
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 187, 32

Conread position: 86-572
Cow position: chr10:42663933-42664382 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 202, 12

Conread position: 87-526
Cow position: chr10:19839855-19840294 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 21

Conread position: 151-286
Cow position: chr10:50018293-50018160 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 164-416
Cow position: chr10:20383768-20383515 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 97

Conread position: 167-566
Cow position: chr10:24314046-24313654 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 259
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 122, 83

Conread position: 191-576
Cow position: chr10:13366050-13365679 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 197

Conread position: 201-576
Cow position: chr10:184078-184460 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 49

Conread position: 219-438
Cow position: chr10:31537159-31537379 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 159

Conread position: 222-464
Cow position: chr10:65307957-65308201 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 172

Conread position: 250-516
Cow position: chr10:39904790-39905055 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 251-566
Cow position: chr10:14928513-14928810 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 20

Conread position: 271-550
Cow position: chr10:22842665-22842938 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 127

Conread position: 271-576
Cow position: chr10:39854130-39853823 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 290-567
Cow position: chr10:14951804-14952059 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 226, 28

Conread position: 295-574
Cow position: chr10:46694466-46694187 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 88

Conread position: 392-576
Cow position: chr10:55093247-55093432 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 78

Conread position: 424-576
Cow position: chr10:33346638-33346791 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 61

Show alignments to all cow chromosomes.