Cow genome map

Conread name: Lym2-sn78_G06.f

Conread position: 1-511
Cow position:
Alignm length: 519
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 1-532
Cow position:
Alignm length: 546
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 106

Conread position: 4-201
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 8

Conread position: 4-321
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 109

Conread position: 4-417
Cow position:
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 24

Conread position: 4-543
Cow position:
Alignm length: 555
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 110

Conread position: 4-559
Cow position:
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 4-567
Cow position:
Alignm length: 585
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 4-573
Cow position:
Alignm length: 586
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 101

Conread position: 4-576
Cow position:
Alignm length: 584
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 101

Conread position: 4-576
Cow position:
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 4-576
Cow position:
Alignm length: 593
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 4-576
Cow position:
Alignm length: 582
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 29

Conread position: 6-576
Cow position:
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 63

Conread position: 6-576
Cow position:
Alignm length: 577
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 8-574
Cow position:
Alignm length: 572
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 32

Conread position: 9-551
Cow position:
Alignm length: 555
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 23

Conread position: 9-576
Cow position:
Alignm length: 581
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 10-357
Cow position:
Alignm length: 357
Alignm identity: 229
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 143

Conread position: 10-576
Cow position:
Alignm length: 580
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 16-360
Cow position:
Alignm length: 354
Alignm identity: 241
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 14, 27

Conread position: 18-576
Cow position:
Alignm length: 572
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 93

Conread position: 18-576
Cow position:
Alignm length: 568
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 18-576
Cow position:
Alignm length: 574
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 19-576
Cow position:
Alignm length: 583
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 19-576
Cow position:
Alignm length: 576
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 201

Conread position: 23-574
Cow position:
Alignm length: 561
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 14

Conread position: 23-574
Cow position:
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 19

Conread position: 36-259
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 38

Conread position: 37-245
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 73

Conread position: 37-246
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 47

Conread position: 37-436
Cow position:
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-481
Cow position:
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-567
Cow position:
Alignm length: 540
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 71

Conread position: 37-574
Cow position:
Alignm length: 548
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 67

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 68

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 71

Conread position: 37-576
Cow position:
Alignm length: 551
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 71

Conread position: 37-576
Cow position:
Alignm length: 552
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 63

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 67

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 71

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 73

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 71

Conread position: 37-576
Cow position:
Alignm length: 551
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 55

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position:
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 40-574
Cow position:
Alignm length: 549
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 43-576
Cow position:
Alignm length: 544
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 90

Conread position: 44-315
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 42

Conread position: 45-372
Cow position:
Alignm length: 330
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 57

Conread position: 47-382
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 47-405
Cow position:
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 302

Conread position: 48-307
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 201, 54

Conread position: 49-576
Cow position:
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 55

Conread position: 49-576
Cow position:
Alignm length: 536
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 49-576
Cow position:
Alignm length: 537
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 50-576
Cow position:
Alignm length: 537
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 52

Conread position: 53-417
Cow position:
Alignm length: 366
Alignm identity: 251
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 231, 51

Conread position: 57-574
Cow position:
Alignm length: 529
Alignm identity: 344
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 204, 52

Conread position: 63-378
Cow position:
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 66-442
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 38

Conread position: 68-576
Cow position:
Alignm length: 524
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 39

Conread position: 72-544
Cow position:
Alignm length: 476
Alignm identity: 318
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 187, 32

Conread position: 86-572
Cow position:
Alignm length: 492
Alignm identity: 339
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 202, 12

Conread position: 87-526
Cow position:
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 21

Conread position: 151-286
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 164-416
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 97

Conread position: 167-566
Cow position:
Alignm length: 403
Alignm identity: 259
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 122, 83

Conread position: 191-576
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 197

Conread position: 201-576
Cow position:
Alignm length: 388
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 49

Conread position: 219-438
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 159

Conread position: 222-464
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 172

Conread position: 250-516
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 251-566
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 20

Conread position: 271-550
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 127

Conread position: 271-576
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 290-567
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 226, 28

Conread position: 295-574
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 88

Conread position: 392-576
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 78

Conread position: 424-576
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 61

Show alignments to all cow chromosomes.