Cow genome map

Conread name: Lym2-sn78_G06.f

Conread position: 1-308
Cow position: chr12:3630719-3631026 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 112

Conread position: 4-332
Cow position: chr12:2840055-2839724 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 28, 60

Conread position: 4-576
Cow position: chr12:15951715-15951148 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 36

Conread position: 4-576
Cow position: chr12:16326277-16326814 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 4-576
Cow position: chr12:21499651-21500225 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 10-576
Cow position: chr12:20998583-20998016 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 107

Conread position: 13-566
Cow position: chr12:10483591-10484139 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 363
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 55, 5

Conread position: 18-576
Cow position: chr12:21901506-21902055 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 27

Conread position: 18-576
Cow position: chr12:45261191-45261739 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 35

Conread position: 19-565
Cow position: chr12:1137144-1137691 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 30-576
Cow position: chr12:8310748-8311297 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 19

Conread position: 37-212
Cow position: chr12:21883595-21883775 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 75

Conread position: 37-405
Cow position: chr12:21197402-21197770 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 71

Conread position: 37-573
Cow position: chr12:27933376-27932832 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 67

Conread position: 37-574
Cow position: chr12:32653117-32653658 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-575
Cow position: chr12:25101494-25100946 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 37-576
Cow position: chr12:252487-251941 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 66

Conread position: 37-576
Cow position: chr12:1402063-1402608 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 68

Conread position: 37-576
Cow position: chr12:2282117-2282662 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 68

Conread position: 37-576
Cow position: chr12:3360483-3361020 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position: chr12:6407072-6406532 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 37-576
Cow position: chr12:11097811-11098358 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position: chr12:21207267-21207810 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position: chr12:21255079-21254540 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 78

Conread position: 37-576
Cow position: chr12:21426273-21426810 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 68

Conread position: 37-576
Cow position: chr12:21941349-21941881 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 67

Conread position: 37-576
Cow position: chr12:22206175-22205631 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position: chr12:26141383-26141930 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position: chr12:37558129-37558672 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position: chr12:42860245-42859711 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position: chr12:43031803-43031268 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 42

Conread position: 40-576
Cow position: chr12:8678546-8678006 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 42-505
Cow position: chr12:13949906-13949471 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 302
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 187, 19

Conread position: 49-574
Cow position: chr12:2380-2913 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 49-575
Cow position: chr12:22332201-22332739 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 59

Conread position: 50-429
Cow position: chr12:22026341-22026719 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 86, 54

Conread position: 54-441
Cow position: chr12:48404637-48405023 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 55

Conread position: 57-576
Cow position: chr12:14663020-14662517 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 47

Conread position: 82-576
Cow position: chr12:28766401-28765903 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 23

Conread position: 157-333
Cow position: chr12:601357-601176 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 238-575
Cow position: chr12:26947205-26946877 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 241-381
Cow position: chr12:42420340-42420200 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 7

Conread position: 293-568
Cow position: chr12:3632422-3632155 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 0

Show alignments to all cow chromosomes.