Cow genome map
Conread name: | Lym2-sn78_G06.f |
Conread position: | 1-308 |
Cow position: | chr12:3630719-3631026 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 216 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 20, 112 |
Conread position: | 4-332 |
Cow position: | chr12:2840055-2839724 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 241 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 28, 60 |
Conread position: | 4-576 |
Cow position: | chr12:15951715-15951148 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 36 |
Conread position: | 4-576 |
Cow position: | chr12:16326277-16326814 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 4-576 |
Cow position: | chr12:21499651-21500225 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 150 |
Conread position: | 10-576 |
Cow position: | chr12:20998583-20998016 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 107 |
Conread position: | 13-566 |
Cow position: | chr12:10483591-10484139 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 363 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 55, 5 |
Conread position: | 18-576 |
Cow position: | chr12:21901506-21902055 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 27 |
Conread position: | 18-576 |
Cow position: | chr12:45261191-45261739 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 35 |
Conread position: | 19-565 |
Cow position: | chr12:1137144-1137691 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 35 |
Conread position: | 30-576 |
Cow position: | chr12:8310748-8311297 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 19 |
Conread position: | 37-212 |
Cow position: | chr12:21883595-21883775 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 29, 75 |
Conread position: | 37-405 |
Cow position: | chr12:21197402-21197770 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 71 |
Conread position: | 37-573 |
Cow position: | chr12:27933376-27932832 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 67 |
Conread position: | 37-574 |
Cow position: | chr12:32653117-32653658 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-575 |
Cow position: | chr12:25101494-25100946 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 68 |
Conread position: | 37-576 |
Cow position: | chr12:252487-251941 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 66 |
Conread position: | 37-576 |
Cow position: | chr12:1402063-1402608 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 68 |
Conread position: | 37-576 |
Cow position: | chr12:2282117-2282662 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 68 |
Conread position: | 37-576 |
Cow position: | chr12:3360483-3361020 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr12:6407072-6406532 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 33 |
Conread position: | 37-576 |
Cow position: | chr12:11097811-11098358 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr12:21207267-21207810 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr12:21255079-21254540 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 78 |
Conread position: | 37-576 |
Cow position: | chr12:21426273-21426810 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 68 |
Conread position: | 37-576 |
Cow position: | chr12:21941349-21941881 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 67 |
Conread position: | 37-576 |
Cow position: | chr12:22206175-22205631 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr12:26141383-26141930 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 37-576 |
Cow position: | chr12:37558129-37558672 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr12:42860245-42859711 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr12:43031803-43031268 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 42 |
Conread position: | 40-576 |
Cow position: | chr12:8678546-8678006 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 66 |
Conread position: | 42-505 |
Cow position: | chr12:13949906-13949471 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 302 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 187, 19 |
Conread position: | 49-574 |
Cow position: | chr12:2380-2913 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 59 |
Conread position: | 49-575 |
Cow position: | chr12:22332201-22332739 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 59 |
Conread position: | 50-429 |
Cow position: | chr12:22026341-22026719 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 254 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 86, 54 |
Conread position: | 54-441 |
Cow position: | chr12:48404637-48405023 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 55 |
Conread position: | 57-576 |
Cow position: | chr12:14663020-14662517 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 47 |
Conread position: | 82-576 |
Cow position: | chr12:28766401-28765903 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 23 |
Conread position: | 157-333 |
Cow position: | chr12:601357-601176 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 136 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 238-575 |
Cow position: | chr12:26947205-26946877 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 157 |
Conread position: | 241-381 |
Cow position: | chr12:42420340-42420200 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 49, 7 |
Conread position: | 293-568 |
Cow position: | chr12:3632422-3632155 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 192 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.