Cow genome map
Conread name: | Lym2-sn78_G06.f |
Conread position: | 1-274 |
Cow position: | chr13:15542780-15543057 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 205 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 142, 24 |
Conread position: | 1-429 |
Cow position: | chr13:60704209-60703786 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 290 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 17, 111 |
Conread position: | 4-206 |
Cow position: | chr13:41607027-41607227 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 60 |
Conread position: | 4-428 |
Cow position: | chr13:46733035-46732609 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 111 |
Conread position: | 4-516 |
Cow position: | chr13:34868089-34868606 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 8 |
Conread position: | 4-575 |
Cow position: | chr13:34187366-34186791 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 50 |
Conread position: | 4-576 |
Cow position: | chr13:54283912-54284464 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 26 |
Conread position: | 5-351 |
Cow position: | chr13:35029839-35030181 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 206 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 15, 104 |
Conread position: | 8-516 |
Cow position: | chr13:2231996-2232493 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 32 |
Conread position: | 10-248 |
Cow position: | chr13:34767896-34767676 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 172 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 10-575 |
Cow position: | chr13:30063480-30064019 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 373 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 8, 35 |
Conread position: | 11-575 |
Cow position: | chr13:20543040-20542480 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 99 |
Conread position: | 12-559 |
Cow position: | chr13:48356658-48357183 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 96 |
Conread position: | 13-508 |
Cow position: | chr13:2305833-2306328 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 23 |
Conread position: | 13-572 |
Cow position: | chr13:14391988-14392528 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 359 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 26, 44 |
Conread position: | 13-574 |
Cow position: | chr13:6668804-6668230 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 100 |
Conread position: | 17-575 |
Cow position: | chr13:33336996-33336448 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 319 |
Conread position: | 18-575 |
Cow position: | chr13:34143328-34142765 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 31 |
Conread position: | 18-576 |
Cow position: | chr13:2909113-2908555 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 31 |
Conread position: | 18-576 |
Cow position: | chr13:3276486-3277049 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 93 |
Conread position: | 18-576 |
Cow position: | chr13:31831938-31832495 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 87 |
Conread position: | 18-576 |
Cow position: | chr13:33928215-33927675 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 31 |
Conread position: | 18-576 |
Cow position: | chr13:34692502-34693058 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 31 |
Conread position: | 18-576 |
Cow position: | chr13:62328252-62327689 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 93 |
Conread position: | 19-575 |
Cow position: | chr13:34936469-34937041 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 87 |
Conread position: | 30-560 |
Cow position: | chr13:23410649-23410124 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 340 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 80, 13 |
Conread position: | 35-576 |
Cow position: | chr13:34912017-34911483 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 67 |
Conread position: | 36-568 |
Cow position: | chr13:30140342-30140880 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 72 |
Conread position: | 36-576 |
Cow position: | chr13:15080821-15080319 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 347 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 252, 70 |
Conread position: | 36-576 |
Cow position: | chr13:31560541-31561082 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 357 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 107, 32 |
Conread position: | 37-246 |
Cow position: | chr13:53834121-53834334 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 37-424 |
Cow position: | chr13:4481825-4482212 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-486 |
Cow position: | chr13:32544297-32544744 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 67 |
Conread position: | 37-558 |
Cow position: | chr13:3654957-3654439 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 67 |
Conread position: | 37-561 |
Cow position: | chr13:30302421-30302944 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 65 |
Conread position: | 37-571 |
Cow position: | chr13:15521165-15520625 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 67 |
Conread position: | 37-573 |
Cow position: | chr13:2297447-2296906 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 20 |
Conread position: | 37-574 |
Cow position: | chr13:4940435-4940981 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 71 |
Conread position: | 37-574 |
Cow position: | chr13:31734723-31734188 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 71 |
Conread position: | 37-575 |
Cow position: | chr13:1593806-1593261 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 39 |
Conread position: | 37-575 |
Cow position: | chr13:32986695-32986162 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 54 |
Conread position: | 37-576 |
Cow position: | chr13:2389447-2388923 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 68 |
Conread position: | 37-576 |
Cow position: | chr13:4872428-4872972 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 37-576 |
Cow position: | chr13:15925034-15924489 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 68 |
Conread position: | 37-576 |
Cow position: | chr13:17307834-17308370 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 71 |
Conread position: | 37-576 |
Cow position: | chr13:21840847-21840299 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 68 |
Conread position: | 37-576 |
Cow position: | chr13:30245385-30244838 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr13:31612986-31612440 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 68 |
Conread position: | 37-576 |
Cow position: | chr13:32738459-32737927 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 67 |
Conread position: | 37-576 |
Cow position: | chr13:34043014-34042474 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 64 |
Conread position: | 37-576 |
Cow position: | chr13:35756580-35757136 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr13:50108816-50109357 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 25 |
Conread position: | 40-472 |
Cow position: | chr13:30237530-30237956 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 64 |
Conread position: | 43-364 |
Cow position: | chr13:13046467-13046142 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 63 |
Conread position: | 44-576 |
Cow position: | chr13:34326303-34325780 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 61 |
Conread position: | 49-575 |
Cow position: | chr13:30657600-30657080 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 55 |
Conread position: | 49-576 |
Cow position: | chr13:33825376-33824836 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 59 |
Conread position: | 63-341 |
Cow position: | chr13:32525359-32525085 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 200 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 198, 41 |
Conread position: | 67-381 |
Cow position: | chr13:3058614-3058293 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 43 |
Conread position: | 97-367 |
Cow position: | chr13:3338257-3338530 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 193 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 157, 7 |
Conread position: | 106-576 |
Cow position: | chr13:9043928-9044396 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 197 |
Conread position: | 144-417 |
Cow position: | chr13:47859916-47860182 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 190 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 144, 7 |
Conread position: | 165-307 |
Cow position: | chr13:32606693-32606548 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 189-576 |
Cow position: | chr13:13324262-13324644 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 61 |
Conread position: | 193-576 |
Cow position: | chr13:56730764-56730391 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 33 |
Conread position: | 198-560 |
Cow position: | chr13:43801502-43801854 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 233 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 264, 52 |
Conread position: | 228-576 |
Cow position: | chr13:49973226-49973579 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 166 |
Conread position: | 234-573 |
Cow position: | chr13:23003966-23003624 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 160 |
Conread position: | 319-571 |
Cow position: | chr13:34767638-34767396 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 189 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 196, 55 |
Show alignments to all cow chromosomes.