Cow genome map


           Conread name:
           Lym2-sn78_G06.f
        

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 25
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 113
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 113
               

               Conread position:
               3-247
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               4-550
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               4-562
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               4-567
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               4-574
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 28
               

               Conread position:
               4-574
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 104
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 38
               

               Conread position:
               5-479
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               6-546
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               7-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 387
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 32
               

               Conread position:
               9-483
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               9-576
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               374
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               283, 14
               

               Conread position:
               10-571
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 36
               

               Conread position:
               10-574
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 95
               

               Conread position:
               12-560
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 88
               

               Conread position:
               13-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               16-576
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               18-247
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               18-574
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 31
               

               Conread position:
               18-576
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 31
               

               Conread position:
               18-576
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               19-568
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               23-576
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 14
               

               Conread position:
               23-576
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               32-571
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               360
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               111, 42
               

               Conread position:
               34-576
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               36-342
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               107, 64
               

               Conread position:
               36-440
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 68
               

               Conread position:
               36-520
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               321
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               36-544
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               37-244
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-566
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               338
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               37-574
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 67
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 73
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 207
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 73
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               39-572
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               40-456
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 63
               

               Conread position:
               40-575
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 64
               

               Conread position:
               40-576
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 64
               

               Conread position:
               43-224
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               45-324
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 171
               

               Conread position:
               45-576
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               45-576
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               49-572
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               49-576
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               50-576
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               57-565
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               61-576
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               343
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               65-576
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               66-576
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               67-298
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               80, 38
               

               Conread position:
               82-576
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               88-576
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 16
               

               Conread position:
               107-576
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               182-502
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               182-575
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 168
               

               Conread position:
               192-576
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 190
               

               Conread position:
               228-576
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               242-438
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               245-576
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 147
               

               Conread position:
               293-572
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 99
               

               Conread position:
               392-576
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               126, 30
               
Show alignments to all cow chromosomes.