Cow genome map
Conread name: | Lym2-sn78_G06.f |
Conread position: | 1-340 |
Cow position: | chr14:34774792-34775129 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 25 |
Conread position: | 1-342 |
Cow position: | chr14:44780722-44780380 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 237 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 32, 113 |
Conread position: | 1-567 |
Cow position: | chr14:44783062-44782499 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 113 |
Conread position: | 3-247 |
Cow position: | chr14:50134106-50134349 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 176 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 16, 51 |
Conread position: | 4-229 |
Cow position: | chr14:38145831-38146060 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 155 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 24, 101 |
Conread position: | 4-259 |
Cow position: | chr14:44551244-44551506 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 103 |
Conread position: | 4-550 |
Cow position: | chr14:40170490-40169940 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 108 |
Conread position: | 4-562 |
Cow position: | chr14:44376624-44377186 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 99 |
Conread position: | 4-567 |
Cow position: | chr14:11467793-11468348 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 18 |
Conread position: | 4-574 |
Cow position: | chr14:46083824-46084391 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 28 |
Conread position: | 4-574 |
Cow position: | chr14:47589069-47589640 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 24 |
Conread position: | 4-576 |
Cow position: | chr14:22018587-22019164 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 103 |
Conread position: | 4-576 |
Cow position: | chr14:35928362-35928950 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 151 |
Conread position: | 4-576 |
Cow position: | chr14:40338899-40339454 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 104 |
Conread position: | 4-576 |
Cow position: | chr14:44225607-44226168 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 99 |
Conread position: | 4-576 |
Cow position: | chr14:45833352-45833925 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 38 |
Conread position: | 5-479 |
Cow position: | chr14:47921211-47921672 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 320 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 35, 92 |
Conread position: | 6-546 |
Cow position: | chr14:31607732-31607187 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 104 |
Conread position: | 6-567 |
Cow position: | chr14:14309871-14309314 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 103 |
Conread position: | 7-576 |
Cow position: | chr14:2283538-2284110 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 387 |
Conread position: | 8-283 |
Cow position: | chr14:41085608-41085335 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 32 |
Conread position: | 9-483 |
Cow position: | chr14:44580138-44580597 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 90 |
Conread position: | 9-576 |
Cow position: | chr14:47653968-47654509 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 374 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 283, 14 |
Conread position: | 10-571 |
Cow position: | chr14:35387931-35387383 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 36 |
Conread position: | 10-574 |
Cow position: | chr14:45079732-45080289 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 95 |
Conread position: | 12-560 |
Cow position: | chr14:44261891-44261338 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 88 |
Conread position: | 13-576 |
Cow position: | chr14:44685243-44685814 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 97 |
Conread position: | 16-576 |
Cow position: | chr14:13660790-13660217 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 91 |
Conread position: | 18-247 |
Cow position: | chr14:1499957-1500193 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 171 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 29, 88 |
Conread position: | 18-574 |
Cow position: | chr14:44130135-44130684 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 31 |
Conread position: | 18-576 |
Cow position: | chr14:36967465-36968026 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 31 |
Conread position: | 18-576 |
Cow position: | chr14:45712774-45712215 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 91 |
Conread position: | 19-568 |
Cow position: | chr14:45205285-45205841 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 22 |
Conread position: | 23-576 |
Cow position: | chr14:17684611-17685167 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 14 |
Conread position: | 23-576 |
Cow position: | chr14:41755083-41755615 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 82 |
Conread position: | 32-571 |
Cow position: | chr14:23260712-23260156 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 360 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 111, 42 |
Conread position: | 34-576 |
Cow position: | chr14:16920458-16919919 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 9 |
Conread position: | 36-342 |
Cow position: | chr14:14422783-14422489 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 222 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 107, 64 |
Conread position: | 36-440 |
Cow position: | chr14:48703831-48704232 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 258 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 106, 68 |
Conread position: | 36-520 |
Cow position: | chr14:48150716-48150240 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 321 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 108, 55 |
Conread position: | 36-544 |
Cow position: | chr14:43552645-43553161 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 73 |
Conread position: | 37-244 |
Cow position: | chr14:2283213-2283424 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 157 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-566 |
Cow position: | chr14:46669553-46670068 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 338 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 28, 69 |
Conread position: | 37-574 |
Cow position: | chr14:23256582-23257128 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr14:749801-750341 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 71 |
Conread position: | 37-576 |
Cow position: | chr14:5528292-5528833 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr14:7471601-7472145 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr14:9044790-9045337 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr14:11154928-11154394 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 69 |
Conread position: | 37-576 |
Cow position: | chr14:13272488-13273023 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 67 |
Conread position: | 37-576 |
Cow position: | chr14:13302256-13302801 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr14:16274072-16273524 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 68 |
Conread position: | 37-576 |
Cow position: | chr14:17001822-17001283 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 50 |
Conread position: | 37-576 |
Cow position: | chr14:17492226-17491685 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 71 |
Conread position: | 37-576 |
Cow position: | chr14:20781684-20782227 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 69 |
Conread position: | 37-576 |
Cow position: | chr14:22032457-22031916 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 68 |
Conread position: | 37-576 |
Cow position: | chr14:28994631-28994083 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 70 |
Conread position: | 37-576 |
Cow position: | chr14:29048669-29048132 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 73 |
Conread position: | 37-576 |
Cow position: | chr14:30585711-30585180 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr14:30597150-30596613 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 207 |
Conread position: | 37-576 |
Cow position: | chr14:37223127-37223673 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 68 |
Conread position: | 37-576 |
Cow position: | chr14:45672818-45672273 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 73 |
Conread position: | 37-576 |
Cow position: | chr14:50109805-50110337 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 58 |
Conread position: | 39-572 |
Cow position: | chr14:44856198-44855659 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 65 |
Conread position: | 40-456 |
Cow position: | chr14:45160092-45160515 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 63 |
Conread position: | 40-575 |
Cow position: | chr14:48255084-48254545 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 64 |
Conread position: | 40-576 |
Cow position: | chr14:19329038-19328497 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 64 |
Conread position: | 43-224 |
Cow position: | chr14:17241472-17241651 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 45-324 |
Cow position: | chr14:44616524-44616807 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 197 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 7, 171 |
Conread position: | 45-576 |
Cow position: | chr14:23690994-23690458 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 57 |
Conread position: | 45-576 |
Cow position: | chr14:45767242-45767773 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 27 |
Conread position: | 49-572 |
Cow position: | chr14:45850465-45850989 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 59 |
Conread position: | 49-576 |
Cow position: | chr14:47623808-47624331 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 58 |
Conread position: | 50-576 |
Cow position: | chr14:38533059-38532521 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 18 |
Conread position: | 57-565 |
Cow position: | chr14:23529747-23529263 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 339 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 86, 50 |
Conread position: | 61-576 |
Cow position: | chr14:13326860-13326370 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 343 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 82, 43 |
Conread position: | 65-576 |
Cow position: | chr14:7831281-7830769 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 39 |
Conread position: | 66-576 |
Cow position: | chr14:45916655-45917189 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 67-298 |
Cow position: | chr14:13778119-13778357 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 172 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 80, 38 |
Conread position: | 82-576 |
Cow position: | chr14:33394498-33394005 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 63 |
Conread position: | 88-576 |
Cow position: | chr14:12608502-12608953 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 16 |
Conread position: | 107-576 |
Cow position: | chr14:44421852-44422325 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 133 |
Conread position: | 182-502 |
Cow position: | chr14:13622236-13621915 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 22 |
Conread position: | 182-575 |
Cow position: | chr14:42151698-42152093 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 168 |
Conread position: | 192-576 |
Cow position: | chr14:45303976-45303593 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 190 |
Conread position: | 228-576 |
Cow position: | chr14:23901381-23901029 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 166 |
Conread position: | 242-438 |
Cow position: | chr14:1500467-1500659 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 153 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 46, 141 |
Conread position: | 245-576 |
Cow position: | chr14:46464509-46464844 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 147 |
Conread position: | 293-572 |
Cow position: | chr14:41085295-41085015 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 99 |
Conread position: | 392-576 |
Cow position: | chr14:19619811-19619991 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 143 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 126, 30 |
Show alignments to all cow chromosomes.