Cow genome map
| Conread name: | Lym2-sn78_G06.f |
| Conread position: | 4-272 |
| Cow position: | chr19:36476992-36477263 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 4-369 |
| Cow position: | chr19:35376194-35376565 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 4-567 |
| Cow position: | chr19:28582006-28581454 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 4-574 |
| Cow position: | chr19:34055-34629 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 103 |
| Conread position: | 4-574 |
| Cow position: | chr19:76602-76056 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 4-576 |
| Cow position: | chr19:359864-359294 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 4-576 |
| Cow position: | chr19:30754805-30755395 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 8-321 |
| Cow position: | chr19:32238214-32237898 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 135, 37 |
| Conread position: | 8-446 |
| Cow position: | chr19:4252715-4252278 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 32 |
| Conread position: | 8-575 |
| Cow position: | chr19:32223776-32223233 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 10-275 |
| Cow position: | chr19:6553046-6553304 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 10-356 |
| Cow position: | chr19:42649426-42649082 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 10-575 |
| Cow position: | chr19:261080-261658 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 10-576 |
| Cow position: | chr19:40888008-40887436 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 95 |
| Conread position: | 18-225 |
| Cow position: | chr19:801641-801850 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 18-485 |
| Cow position: | chr19:4533093-4532632 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 18-576 |
| Cow position: | chr19:416299-416876 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 31 |
| Conread position: | 19-438 |
| Cow position: | chr19:378230-377799 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 132, 11 |
| Conread position: | 23-570 |
| Cow position: | chr19:171085-170538 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 23-576 |
| Cow position: | chr19:55078401-55078961 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 36-267 |
| Cow position: | chr19:350907-350665 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 108, 72 |
| Conread position: | 36-566 |
| Cow position: | chr19:20125301-20125808 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 59 |
| Conread position: | 36-576 |
| Cow position: | chr19:35978935-35979480 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 271 |
| Conread position: | 37-199 |
| Cow position: | chr19:544222-544056 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 37-243 |
| Cow position: | chr19:33872912-33873117 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 37-381 |
| Cow position: | chr19:685523-685862 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 211, 71 |
| Conread position: | 37-486 |
| Cow position: | chr19:32193252-32193701 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 73 |
| Conread position: | 37-532 |
| Cow position: | chr19:548064-548535 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 67 |
| Conread position: | 37-576 |
| Cow position: | chr19:37576-38110 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 71 |
| Conread position: | 37-576 |
| Cow position: | chr19:171879-172426 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 68 |
| Conread position: | 37-576 |
| Cow position: | chr19:203631-204176 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 68 |
| Conread position: | 37-576 |
| Cow position: | chr19:439978-439442 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 37-576 |
| Cow position: | chr19:772278-772814 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 37-576 |
| Cow position: | chr19:4385156-4385695 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 37-576 |
| Cow position: | chr19:7341740-7342283 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 37-576 |
| Cow position: | chr19:10672638-10672091 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 37-576 |
| Cow position: | chr19:28592951-28593492 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 45 |
| Conread position: | 37-576 |
| Cow position: | chr19:32212392-32211858 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 71 |
| Conread position: | 37-576 |
| Cow position: | chr19:32244348-32244899 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 75 |
| Conread position: | 37-576 |
| Cow position: | chr19:33941280-33941825 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 37-576 |
| Cow position: | chr19:39390191-39390723 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 37-576 |
| Cow position: | chr19:40852762-40852223 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 37-576 |
| Cow position: | chr19:43143384-43143931 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 38-381 |
| Cow position: | chr19:52152580-52152242 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 70 |
| Conread position: | 40-576 |
| Cow position: | chr19:32665204-32665745 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 68 |
| Conread position: | 45-559 |
| Cow position: | chr19:15953553-15954051 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 63 |
| Conread position: | 48-526 |
| Cow position: | chr19:20111548-20111071 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 49-516 |
| Cow position: | chr19:29209247-29209712 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 57 |
| Conread position: | 49-576 |
| Cow position: | chr19:30371956-30372489 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 49-576 |
| Cow position: | chr19:31341404-31341937 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 36 |
| Conread position: | 52-381 |
| Cow position: | chr19:1031797-1032121 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 52 |
| Conread position: | 54-574 |
| Cow position: | chr19:39688235-39688742 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 52 |
| Conread position: | 66-576 |
| Cow position: | chr19:7488010-7488528 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 72-356 |
| Cow position: | chr19:7405727-7405456 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 216, 32 |
| Conread position: | 119-574 |
| Cow position: | chr19:39546385-39546840 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 44 |
| Conread position: | 133-477 |
| Cow position: | chr19:561731-561387 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 157-576 |
| Cow position: | chr19:893810-893400 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 21 |
| Conread position: | 188-509 |
| Cow position: | chr19:27052940-27052623 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 202-576 |
| Cow position: | chr19:543790-543411 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 210-468 |
| Cow position: | chr19:28376376-28376627 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 259-576 |
| Cow position: | chr19:350387-350076 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 269-576 |
| Cow position: | chr19:6553519-6553817 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 295-542 |
| Cow position: | chr19:18728790-18729031 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 226, 73 |
| Conread position: | 306-576 |
| Cow position: | chr19:32237736-32237467 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 38 |
| Conread position: | 395-574 |
| Cow position: | chr19:687097-687278 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 426-576 |
| Cow position: | chr19:1032140-1032290 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 91, 31 |
Show alignments to all cow chromosomes.