Cow genome map
Conread name: | Lym2-sn78_G06.f |
Conread position: | 1-414 |
Cow position: | chr20:8994234-8993811 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 291 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 22, 129 |
Conread position: | 1-576 |
Cow position: | chr20:5534530-5535109 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 104 |
Conread position: | 2-559 |
Cow position: | chr20:2676704-2677270 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 106 |
Conread position: | 4-511 |
Cow position: | chr20:29572594-29572088 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 32 |
Conread position: | 4-573 |
Cow position: | chr20:22206121-22206705 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 110 |
Conread position: | 8-518 |
Cow position: | chr20:28593335-28593854 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 102 |
Conread position: | 8-576 |
Cow position: | chr20:3252540-3251962 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 32 |
Conread position: | 9-514 |
Cow position: | chr20:22718076-22717586 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 25 |
Conread position: | 9-575 |
Cow position: | chr20:20905591-20905034 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 379 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 24, 103 |
Conread position: | 10-576 |
Cow position: | chr20:13665573-13665038 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 57 |
Conread position: | 18-503 |
Cow position: | chr20:4800033-4799554 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 32 |
Conread position: | 19-576 |
Cow position: | chr20:13762514-13763076 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 18 |
Conread position: | 36-238 |
Cow position: | chr20:29947810-29948016 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 111, 68 |
Conread position: | 36-282 |
Cow position: | chr20:5575317-5575555 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 169, 68 |
Conread position: | 36-558 |
Cow position: | chr20:2791725-2791199 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 351 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 108, 69 |
Conread position: | 36-576 |
Cow position: | chr20:28160405-28160943 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 70 |
Conread position: | 36-576 |
Cow position: | chr20:31379244-31378714 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 18 |
Conread position: | 37-193 |
Cow position: | chr20:35118873-35119032 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 109, 65 |
Conread position: | 37-260 |
Cow position: | chr20:8004887-8004662 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 110, 20 |
Conread position: | 37-473 |
Cow position: | chr20:10846450-10846010 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 69 |
Conread position: | 37-546 |
Cow position: | chr20:21393198-21393706 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-567 |
Cow position: | chr20:23798508-23799045 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 69 |
Conread position: | 37-576 |
Cow position: | chr20:822383-822939 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 71 |
Conread position: | 37-576 |
Cow position: | chr20:7116845-7116297 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 71 |
Conread position: | 37-576 |
Cow position: | chr20:12439134-12438589 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 29 |
Conread position: | 37-576 |
Cow position: | chr20:15291673-15292182 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 67 |
Conread position: | 37-576 |
Cow position: | chr20:18315954-18315423 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 67 |
Conread position: | 37-576 |
Cow position: | chr20:19437590-19438119 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 73 |
Conread position: | 37-576 |
Cow position: | chr20:23470035-23469487 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 67 |
Conread position: | 38-576 |
Cow position: | chr20:5561089-5560543 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 72 |
Conread position: | 40-576 |
Cow position: | chr20:25851362-25850819 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 64 |
Conread position: | 42-315 |
Cow position: | chr20:11276657-11276386 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 196 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 37, 20 |
Conread position: | 42-576 |
Cow position: | chr20:21913957-21914499 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 63 |
Conread position: | 43-246 |
Cow position: | chr20:31124037-31124244 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 101, 67 |
Conread position: | 43-508 |
Cow position: | chr20:35973770-35973307 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 67 |
Conread position: | 43-576 |
Cow position: | chr20:15098237-15097706 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 62 |
Conread position: | 43-576 |
Cow position: | chr20:27868829-27869369 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 55 |
Conread position: | 43-576 |
Cow position: | chr20:30683970-30684507 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 62 |
Conread position: | 45-387 |
Cow position: | chr20:35103583-35103928 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 225 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 106, 56 |
Conread position: | 45-576 |
Cow position: | chr20:15064396-15064938 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 67 |
Conread position: | 49-316 |
Cow position: | chr20:3032575-3032840 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 55 |
Conread position: | 49-576 |
Cow position: | chr20:5483831-5484361 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 56 |
Conread position: | 49-576 |
Cow position: | chr20:8313793-8313268 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 33 |
Conread position: | 49-576 |
Cow position: | chr20:24614187-24614706 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 59 |
Conread position: | 50-504 |
Cow position: | chr20:10102904-10102461 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 32 |
Conread position: | 57-576 |
Cow position: | chr20:3270368-3270876 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 47 |
Conread position: | 61-469 |
Cow position: | chr20:35118982-35119389 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 250 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 97, 21 |
Conread position: | 66-576 |
Cow position: | chr20:9954301-9953814 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 66-576 |
Cow position: | chr20:28565946-28565424 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 39 |
Conread position: | 95-562 |
Cow position: | chr20:7085885-7085426 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 300 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 59, 9 |
Conread position: | 146-576 |
Cow position: | chr20:35119312-35119742 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 169 |
Conread position: | 158-441 |
Cow position: | chr20:19192378-19192093 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 236 |
Conread position: | 173-576 |
Cow position: | chr20:11679345-11678938 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 221 |
Conread position: | 203-436 |
Cow position: | chr20:24390168-24390394 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 45, 183 |
Conread position: | 228-575 |
Cow position: | chr20:29948338-29948670 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 247 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 20, 87 |
Conread position: | 280-571 |
Cow position: | chr20:15947519-15947211 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 103 |
Conread position: | 292-576 |
Cow position: | chr20:25960990-25961275 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 101 |
Conread position: | 306-576 |
Cow position: | chr20:3032965-3033233 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 45 |
Conread position: | 309-576 |
Cow position: | chr20:13680153-13679886 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 83 |
Conread position: | 366-576 |
Cow position: | chr20:3684524-3684316 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 158 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.