Cow genome map


           Conread name:
           Lym2-sn78_G06.f
        

               Conread position:
               4-342
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               4-575
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 38
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 38
               

               Conread position:
               4-576
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 26
               

               Conread position:
               6-576
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               7-576
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               8-181
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               8-262
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 32
               

               Conread position:
               9-447
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               303
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               9-541
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               9-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 71
               

               Conread position:
               10-575
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 223
               

               Conread position:
               10-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               10-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               13-342
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               8, 102
               

               Conread position:
               13-576
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 98
               

               Conread position:
               14-442
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 84
               

               Conread position:
               18-576
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               18-576
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               19-222
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               19-246
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               19-415
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 30
               

               Conread position:
               19-576
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               36-483
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 219
               

               Conread position:
               37-349
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               37-361
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               133, 65
               

               Conread position:
               37-381
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               37-501
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 73
               

               Conread position:
               37-559
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 73
               

               Conread position:
               37-559
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               37-567
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-569
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               37-574
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               37-575
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               37-575
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 35
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 73
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 64
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 24
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               37-576
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               40-386
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 64
               

               Conread position:
               40-574
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 64
               

               Conread position:
               40-576
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               43-574
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               43-576
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 58
               

               Conread position:
               43-576
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               45-575
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               48-576
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 60
               

               Conread position:
               48-576
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               49-296
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 55
               

               Conread position:
               49-342
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               49-574
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               49-576
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               49-576
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               55-405
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               193, 6
               

               Conread position:
               57-576
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               58-420
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               101, 31
               

               Conread position:
               58-576
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 50
               

               Conread position:
               68-576
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               68-576
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               75-576
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 29
               

               Conread position:
               87-576
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               94-444
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               96-422
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               122-576
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 132
               

               Conread position:
               151-573
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               154-576
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 93
               

               Conread position:
               174-576
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               182, 75
               

               Conread position:
               188-527
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               191-576
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               195-575
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 191
               

               Conread position:
               216-576
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               35, 148
               

               Conread position:
               228-576
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 167
               

               Conread position:
               233-576
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               242-555
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               293-576
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 50
               

               Conread position:
               295-574
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 97
               

               Conread position:
               311-576
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               208, 81
               

               Conread position:
               424-576
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.