Cow genome map
Conread name: | Lym2-sn78_G06.f |
Conread position: | 4-342 |
Cow position: | chr22:1046918-1047260 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 239 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 28, 105 |
Conread position: | 4-486 |
Cow position: | chr22:1285397-1284906 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 104 |
Conread position: | 4-575 |
Cow position: | chr22:8136666-8136087 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 26 |
Conread position: | 4-576 |
Cow position: | chr22:11030518-11031078 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 38 |
Conread position: | 4-576 |
Cow position: | chr22:32348424-32347864 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 38 |
Conread position: | 4-576 |
Cow position: | chr22:33350699-33351286 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 67 |
Conread position: | 5-532 |
Cow position: | chr22:45880572-45880038 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 26 |
Conread position: | 6-576 |
Cow position: | chr22:44609177-44609714 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 101 |
Conread position: | 7-576 |
Cow position: | chr22:7277058-7277639 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 103 |
Conread position: | 8-181 |
Cow position: | chr22:40380742-40380916 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 125 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 42, 32 |
Conread position: | 8-262 |
Cow position: | chr22:42771093-42771348 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 152, 32 |
Conread position: | 9-447 |
Cow position: | chr22:37073608-37073205 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 303 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 33, 98 |
Conread position: | 9-541 |
Cow position: | chr22:1321164-1321690 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 100 |
Conread position: | 9-576 |
Cow position: | chr22:6504111-6503559 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 71 |
Conread position: | 10-575 |
Cow position: | chr22:44489427-44490004 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 223 |
Conread position: | 10-576 |
Cow position: | chr22:5233756-5233187 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 102 |
Conread position: | 10-576 |
Cow position: | chr22:16200035-16200592 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 102 |
Conread position: | 13-342 |
Cow position: | chr22:46585769-46585428 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 238 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 8, 102 |
Conread position: | 13-576 |
Cow position: | chr22:693184-693744 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 98 |
Conread position: | 14-442 |
Cow position: | chr22:309272-309695 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 84 |
Conread position: | 18-576 |
Cow position: | chr22:5672289-5672855 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 88 |
Conread position: | 18-576 |
Cow position: | chr22:41420135-41419576 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 19-222 |
Cow position: | chr22:12732510-12732311 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 18, 87 |
Conread position: | 19-246 |
Cow position: | chr22:526358-526125 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 169 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 23, 88 |
Conread position: | 19-415 |
Cow position: | chr22:118261-117860 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 30 |
Conread position: | 19-576 |
Cow position: | chr22:3307160-3306626 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 59 |
Conread position: | 36-483 |
Cow position: | chr22:302413-301966 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 285 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 77, 219 |
Conread position: | 37-349 |
Cow position: | chr22:44456883-44457206 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 73 |
Conread position: | 37-361 |
Cow position: | chr22:13772367-13772681 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 231 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 133, 65 |
Conread position: | 37-381 |
Cow position: | chr22:18476189-18475844 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 71 |
Conread position: | 37-501 |
Cow position: | chr22:6984826-6985296 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 37-559 |
Cow position: | chr22:327577-327058 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 37-559 |
Cow position: | chr22:1293920-1293395 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 37-567 |
Cow position: | chr22:37265023-37265562 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-569 |
Cow position: | chr22:20207612-20207073 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 336 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 99, 68 |
Conread position: | 37-574 |
Cow position: | chr22:46636122-46635598 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 11 |
Conread position: | 37-575 |
Cow position: | chr22:5307688-5308221 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 72 |
Conread position: | 37-575 |
Cow position: | chr22:31312916-31313458 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr22:561127-560587 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 35 |
Conread position: | 37-576 |
Cow position: | chr22:3278778-3278236 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 71 |
Conread position: | 37-576 |
Cow position: | chr22:10546222-10546763 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 37-576 |
Cow position: | chr22:10910280-10909715 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr22:15850917-15851447 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 61 |
Conread position: | 37-576 |
Cow position: | chr22:17329165-17328621 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 45 |
Conread position: | 37-576 |
Cow position: | chr22:21588904-21589442 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 67 |
Conread position: | 37-576 |
Cow position: | chr22:24949401-24949948 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr22:27310205-27309655 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr22:34167903-34168450 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 64 |
Conread position: | 37-576 |
Cow position: | chr22:39469945-39469405 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 24 |
Conread position: | 37-576 |
Cow position: | chr22:44370042-44369506 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 71 |
Conread position: | 37-576 |
Cow position: | chr22:44933551-44934097 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 67 |
Conread position: | 40-386 |
Cow position: | chr22:44395357-44395708 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 64 |
Conread position: | 40-574 |
Cow position: | chr22:44353373-44352841 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 64 |
Conread position: | 40-576 |
Cow position: | chr22:1270930-1270414 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 17 |
Conread position: | 43-574 |
Cow position: | chr22:37131228-37131760 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 43-576 |
Cow position: | chr22:19144120-19143581 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 58 |
Conread position: | 43-576 |
Cow position: | chr22:35672778-35672238 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 65 |
Conread position: | 45-575 |
Cow position: | chr22:36861951-36861413 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 60 |
Conread position: | 48-576 |
Cow position: | chr22:31335450-31334917 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 60 |
Conread position: | 48-576 |
Cow position: | chr22:42990754-42991290 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 58 |
Conread position: | 49-296 |
Cow position: | chr22:36534381-36534126 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 55 |
Conread position: | 49-342 |
Cow position: | chr22:37067325-37067031 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 219 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 113, 60 |
Conread position: | 49-574 |
Cow position: | chr22:46852926-46853459 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 59 |
Conread position: | 49-576 |
Cow position: | chr22:1318978-1319515 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 60 |
Conread position: | 49-576 |
Cow position: | chr22:39882589-39882058 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 59 |
Conread position: | 55-405 |
Cow position: | chr22:41474738-41474389 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 236 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 193, 6 |
Conread position: | 57-576 |
Cow position: | chr22:18816790-18816267 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 47 |
Conread position: | 58-420 |
Cow position: | chr22:10077154-10076796 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 260 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 101, 31 |
Conread position: | 58-576 |
Cow position: | chr22:36736367-36736876 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 50 |
Conread position: | 68-576 |
Cow position: | chr22:158312-157789 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 40 |
Conread position: | 68-576 |
Cow position: | chr22:293550-293042 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 33 |
Conread position: | 75-576 |
Cow position: | chr22:32485718-32485234 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 29 |
Conread position: | 87-576 |
Cow position: | chr22:1878415-1878911 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 21 |
Conread position: | 94-444 |
Cow position: | chr22:4065269-4065625 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 16 |
Conread position: | 96-422 |
Cow position: | chr22:9657954-9658284 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 228 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 54, 48 |
Conread position: | 122-576 |
Cow position: | chr22:36267032-36267478 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 132 |
Conread position: | 151-573 |
Cow position: | chr22:34598367-34598782 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 55 |
Conread position: | 154-576 |
Cow position: | chr22:5933287-5932878 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 93 |
Conread position: | 174-576 |
Cow position: | chr22:44474991-44475362 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 267 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 182, 75 |
Conread position: | 188-527 |
Cow position: | chr22:27283776-27284113 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 9 |
Conread position: | 191-576 |
Cow position: | chr22:36183488-36183876 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 28 |
Conread position: | 195-575 |
Cow position: | chr22:27386698-27386314 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 191 |
Conread position: | 216-576 |
Cow position: | chr22:36274560-36274928 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 251 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 35, 148 |
Conread position: | 228-576 |
Cow position: | chr22:536867-537219 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 167 |
Conread position: | 233-576 |
Cow position: | chr22:13917278-13917621 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 17 |
Conread position: | 242-555 |
Cow position: | chr22:12732061-12731754 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 230 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 49, 8 |
Conread position: | 293-576 |
Cow position: | chr22:36533903-36533625 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 50 |
Conread position: | 295-574 |
Cow position: | chr22:46547828-46547548 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 97 |
Conread position: | 311-576 |
Cow position: | chr22:6020514-6020780 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 161 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 208, 81 |
Conread position: | 424-576 |
Cow position: | chr22:1860847-1860693 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.