Cow genome map
| Conread name: | Lym2-sn78_G06.f |
| Conread position: | 1-574 |
| Cow position: | chr23:15525148-15525726 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 4-461 |
| Cow position: | chr23:22876096-22875633 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 4-576 |
| Cow position: | chr23:1025512-1024942 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 4-576 |
| Cow position: | chr23:2027591-2027001 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 4-576 |
| Cow position: | chr23:2339938-2340513 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 4-576 |
| Cow position: | chr23:34174720-34175297 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 8-567 |
| Cow position: | chr23:16617298-16616740 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 108 |
| Conread position: | 8-576 |
| Cow position: | chr23:5875226-5874656 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 32 |
| Conread position: | 10-333 |
| Cow position: | chr23:1141110-1141433 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 10-576 |
| Cow position: | chr23:4641079-4640506 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 27 |
| Conread position: | 12-422 |
| Cow position: | chr23:31652294-31651911 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 13-574 |
| Cow position: | chr23:22147716-22147134 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 18-351 |
| Cow position: | chr23:31595629-31595285 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 18-381 |
| Cow position: | chr23:2765814-2765459 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 31 |
| Conread position: | 19-575 |
| Cow position: | chr23:989086-988529 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 31-574 |
| Cow position: | chr23:19332835-19332292 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 36-441 |
| Cow position: | chr23:19017280-19017675 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 118, 66 |
| Conread position: | 36-459 |
| Cow position: | chr23:4509677-4510098 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 68 |
| Conread position: | 37-375 |
| Cow position: | chr23:2715923-2716263 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 37-552 |
| Cow position: | chr23:967776-967251 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 37-574 |
| Cow position: | chr23:11778058-11778586 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 37-576 |
| Cow position: | chr23:2795990-2795447 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 37-576 |
| Cow position: | chr23:3882123-3881587 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 68 |
| Conread position: | 37-576 |
| Cow position: | chr23:4359409-4359948 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 20 |
| Conread position: | 37-576 |
| Cow position: | chr23:4815646-4816193 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 37-576 |
| Cow position: | chr23:19489112-19489660 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 37-576 |
| Cow position: | chr23:19951013-19950465 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 37-576 |
| Cow position: | chr23:20301784-20302331 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 37-576 |
| Cow position: | chr23:27399074-27399622 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 37-576 |
| Cow position: | chr23:28912983-28913515 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 37-576 |
| Cow position: | chr23:36031798-36031255 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 40-356 |
| Cow position: | chr23:1330711-1330392 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 66 |
| Conread position: | 43-246 |
| Cow position: | chr23:14975184-14974984 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 43-364 |
| Cow position: | chr23:19449600-19449928 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 43-576 |
| Cow position: | chr23:4434049-4434578 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 43-576 |
| Cow position: | chr23:15220315-15219773 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 63 |
| Conread position: | 43-576 |
| Cow position: | chr23:28216869-28217408 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 65 |
| Conread position: | 49-576 |
| Cow position: | chr23:3013215-3013764 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 49-576 |
| Cow position: | chr23:4276542-4277073 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 49-576 |
| Cow position: | chr23:5779502-5778969 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 55 |
| Conread position: | 50-576 |
| Cow position: | chr23:7273246-7273749 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 58 |
| Conread position: | 53-380 |
| Cow position: | chr23:2574153-2574486 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 51 |
| Conread position: | 54-575 |
| Cow position: | chr23:13508658-13509175 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 57-246 |
| Cow position: | chr23:14966381-14966188 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 57-562 |
| Cow position: | chr23:16481759-16481269 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 51 |
| Conread position: | 66-574 |
| Cow position: | chr23:30636701-30636186 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 76-576 |
| Cow position: | chr23:31446425-31446933 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 102-423 |
| Cow position: | chr23:8980853-8980529 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 110-349 |
| Cow position: | chr23:2725506-2725747 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 149-576 |
| Cow position: | chr23:2313551-2313120 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 246 |
| Conread position: | 151-560 |
| Cow position: | chr23:4751704-4752095 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 158-356 |
| Cow position: | chr23:16616168-16615971 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 127, 92 |
| Conread position: | 160-576 |
| Cow position: | chr23:15176772-15177192 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 235 |
| Conread position: | 174-456 |
| Cow position: | chr23:7750105-7750388 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 172 |
| Conread position: | 178-571 |
| Cow position: | chr23:4888397-4888788 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 208 |
| Conread position: | 211-576 |
| Cow position: | chr23:2524446-2524079 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 241-576 |
| Cow position: | chr23:14974779-14974445 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 293-576 |
| Cow position: | chr23:6216409-6216688 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 104 |
| Conread position: | 294-576 |
| Cow position: | chr23:25684223-25683943 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 313-576 |
| Cow position: | chr23:31591955-31591684 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 326-575 |
| Cow position: | chr23:29474686-29474439 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 63 |
| Conread position: | 347-576 |
| Cow position: | chr23:1327572-1327356 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 407-576 |
| Cow position: | chr23:31595290-31595118 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 409-576 |
| Cow position: | chr23:2574485-2574654 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.