Cow genome map
| Conread name: | Lym2-sn78_G06.f |
| Conread position: | 1-576 |
| Cow position: | chr25:12760039-12759437 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 1-576 |
| Cow position: | chr25:18421231-18421827 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 33 |
| Conread position: | 4-314 |
| Cow position: | chr25:23346113-23345809 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 4-558 |
| Cow position: | chr25:18092597-18093161 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 4-567 |
| Cow position: | chr25:18255780-18255215 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 4-576 |
| Cow position: | chr25:11933947-11933370 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 9-575 |
| Cow position: | chr25:20493945-20494508 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 381 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 17-216 |
| Cow position: | chr25:18172938-18173132 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 5, 41 |
| Conread position: | 18-282 |
| Cow position: | chr25:21544729-21544991 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 18-576 |
| Cow position: | chr25:11375754-11375188 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 18-576 |
| Cow position: | chr25:14015773-14016325 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 18-576 |
| Cow position: | chr25:17469101-17468538 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 18-576 |
| Cow position: | chr25:18028032-18027465 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 18-576 |
| Cow position: | chr25:18061001-18060440 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 353 |
| Conread position: | 23-424 |
| Cow position: | chr25:18411684-18411282 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 23-447 |
| Cow position: | chr25:18302371-18302820 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 37-224 |
| Cow position: | chr25:34014731-34014541 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 37-381 |
| Cow position: | chr25:17563289-17562956 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 37-468 |
| Cow position: | chr25:34347377-34346940 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 37-545 |
| Cow position: | chr25:17560980-17560476 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 37-576 |
| Cow position: | chr25:8674541-8675076 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 67 |
| Conread position: | 37-576 |
| Cow position: | chr25:13780650-13781190 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 37-576 |
| Cow position: | chr25:17589929-17589394 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 71 |
| Conread position: | 37-576 |
| Cow position: | chr25:18276206-18275673 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 45 |
| Conread position: | 37-576 |
| Cow position: | chr25:18890400-18889856 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 37-576 |
| Cow position: | chr25:19916703-19917244 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 71 |
| Conread position: | 37-576 |
| Cow position: | chr25:20777284-20776738 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 37-576 |
| Cow position: | chr25:22147110-22147655 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 37-576 |
| Cow position: | chr25:25506264-25506810 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 37-576 |
| Cow position: | chr25:26278891-26279417 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 35 |
| Conread position: | 37-576 |
| Cow position: | chr25:32579597-32580126 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 71 |
| Conread position: | 37-576 |
| Cow position: | chr25:35362805-35362269 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 40-536 |
| Cow position: | chr25:26866840-26867362 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 64 |
| Conread position: | 43-351 |
| Cow position: | chr25:21901702-21902001 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 43-576 |
| Cow position: | chr25:20629197-20629731 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 46-367 |
| Cow position: | chr25:33243497-33243807 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 143, 29 |
| Conread position: | 47-576 |
| Cow position: | chr25:19288720-19288179 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 50-411 |
| Cow position: | chr25:24171662-24172021 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 67-274 |
| Cow position: | chr25:12943793-12943583 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 67-576 |
| Cow position: | chr25:34656801-34656286 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 139-576 |
| Cow position: | chr25:36240267-36240716 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 149-573 |
| Cow position: | chr25:33991326-33990902 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 150 |
| Conread position: | 203-482 |
| Cow position: | chr25:18173143-18173428 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 305-575 |
| Cow position: | chr25:23345451-23345178 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 211, 78 |
| Conread position: | 316-576 |
| Cow position: | chr25:33665969-33665713 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 392-576 |
| Cow position: | chr25:18195124-18194938 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 447-576 |
| Cow position: | chr25:18303430-18303561 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 117 |
Show alignments to all cow chromosomes.