Cow genome map
| Conread name: | Lym2-sn78_G06.f |
| Conread position: | 4-335 |
| Cow position: | chr26:6516460-6516795 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 4-371 |
| Cow position: | chr26:9851042-9850647 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 4-371 |
| Cow position: | chr26:9854506-9854113 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 4-574 |
| Cow position: | chr26:20262464-20263031 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 4-576 |
| Cow position: | chr26:19351909-19351333 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 33 |
| Conread position: | 5-248 |
| Cow position: | chr26:12655556-12655796 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 9-259 |
| Cow position: | chr26:30675350-30675107 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 10-576 |
| Cow position: | chr26:20254683-20255235 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 97 |
| Conread position: | 12-576 |
| Cow position: | chr26:17397318-17396750 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 22 |
| Conread position: | 13-576 |
| Cow position: | chr26:12588954-12588382 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 18-576 |
| Cow position: | chr26:3691416-3691980 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 19-202 |
| Cow position: | chr26:34012633-34012824 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 20-248 |
| Cow position: | chr26:9846520-9846284 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 37-199 |
| Cow position: | chr26:30590605-30590439 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 37-262 |
| Cow position: | chr26:19998122-19998349 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 37-282 |
| Cow position: | chr26:24201257-24201505 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 37-381 |
| Cow position: | chr26:9112101-9112452 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 37-455 |
| Cow position: | chr26:3074169-3074580 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 37-567 |
| Cow position: | chr26:9563723-9563187 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 37-574 |
| Cow position: | chr26:8869511-8870061 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 37-576 |
| Cow position: | chr26:2352713-2352178 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 42 |
| Conread position: | 37-576 |
| Cow position: | chr26:3031174-3030648 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 37-576 |
| Cow position: | chr26:5674805-5675340 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 45 |
| Conread position: | 37-576 |
| Cow position: | chr26:11254427-11253875 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 366 |
| Conread position: | 37-576 |
| Cow position: | chr26:30782404-30782924 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 39-452 |
| Cow position: | chr26:6850537-6850119 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 65 |
| Conread position: | 39-576 |
| Cow position: | chr26:15145120-15144579 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 43-576 |
| Cow position: | chr26:18854736-18855270 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 65 |
| Conread position: | 45-184 |
| Cow position: | chr26:19142367-19142507 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 57 |
| Conread position: | 48-372 |
| Cow position: | chr26:6489382-6489061 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 49-415 |
| Cow position: | chr26:23605262-23604882 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 61 |
| Conread position: | 49-576 |
| Cow position: | chr26:12574749-12574228 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 55 |
| Conread position: | 50-571 |
| Cow position: | chr26:16904435-16904946 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 54-558 |
| Cow position: | chr26:4605527-4605020 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 55-576 |
| Cow position: | chr26:2198287-2198807 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 57-440 |
| Cow position: | chr26:12665641-12666014 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 53 |
| Conread position: | 112-514 |
| Cow position: | chr26:11537123-11536719 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 155-427 |
| Cow position: | chr26:28423941-28423667 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 189-561 |
| Cow position: | chr26:30589578-30589210 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 201-373 |
| Cow position: | chr26:6602009-6602186 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 250-416 |
| Cow position: | chr26:12659836-12659670 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 253-495 |
| Cow position: | chr26:9845755-9845515 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 279-495 |
| Cow position: | chr26:21350259-21350473 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 428-576 |
| Cow position: | chr26:9849894-9849744 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 428-576 |
| Cow position: | chr26:9853404-9853255 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 78 |
Show alignments to all cow chromosomes.