Cow genome map

Conread name: Lym2-sn78_G06.f

Conread position: 1-379
Cow position:
Alignm length: 390
Alignm identity: 257
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 31

Conread position: 2-576
Cow position:
Alignm length: 594
Alignm identity: 377
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 21

Conread position: 4-236
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 111

Conread position: 4-272
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 102

Conread position: 4-306
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 15

Conread position: 4-322
Cow position:
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 102

Conread position: 4-381
Cow position:
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 101

Conread position: 4-435
Cow position:
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 4-466
Cow position:
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 90

Conread position: 4-467
Cow position:
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 103

Conread position: 4-542
Cow position:
Alignm length: 551
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 105

Conread position: 4-563
Cow position:
Alignm length: 572
Alignm identity: 365
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 15, 30

Conread position: 4-574
Cow position:
Alignm length: 577
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 4-575
Cow position:
Alignm length: 589
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 100

Conread position: 4-576
Cow position:
Alignm length: 584
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 5-575
Cow position:
Alignm length: 581
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 35

Conread position: 6-575
Cow position:
Alignm length: 579
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 101

Conread position: 8-574
Cow position:
Alignm length: 579
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 32

Conread position: 9-324
Cow position:
Alignm length: 326
Alignm identity: 210
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 33

Conread position: 9-568
Cow position:
Alignm length: 571
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 10-259
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 93

Conread position: 10-473
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 141

Conread position: 10-575
Cow position:
Alignm length: 582
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 91

Conread position: 16-448
Cow position:
Alignm length: 438
Alignm identity: 300
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 60

Conread position: 18-576
Cow position:
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 31

Conread position: 18-576
Cow position:
Alignm length: 572
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 18-576
Cow position:
Alignm length: 567
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 24

Conread position: 19-261
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 75

Conread position: 19-458
Cow position:
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 94

Conread position: 23-574
Cow position:
Alignm length: 583
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 364

Conread position: 23-576
Cow position:
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 71

Conread position: 36-514
Cow position:
Alignm length: 487
Alignm identity: 322
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 68, 39

Conread position: 36-567
Cow position:
Alignm length: 540
Alignm identity: 346
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 212, 32

Conread position: 36-568
Cow position:
Alignm length: 546
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 21

Conread position: 36-574
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 72

Conread position: 36-575
Cow position:
Alignm length: 555
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 59

Conread position: 36-575
Cow position:
Alignm length: 559
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 72

Conread position: 37-246
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 85, 73

Conread position: 37-283
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 71

Conread position: 37-286
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 107, 71

Conread position: 37-286
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 107, 71

Conread position: 37-337
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 107, 73

Conread position: 37-340
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 67

Conread position: 37-350
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 24

Conread position: 37-388
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 37-413
Cow position:
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-516
Cow position:
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-532
Cow position:
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 65

Conread position: 37-553
Cow position:
Alignm length: 525
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-572
Cow position:
Alignm length: 544
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 65

Conread position: 37-572
Cow position:
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-575
Cow position:
Alignm length: 550
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 29

Conread position: 37-575
Cow position:
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 68

Conread position: 37-575
Cow position:
Alignm length: 540
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 53

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 70

Conread position: 37-576
Cow position:
Alignm length: 552
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 67

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 65

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 20

Conread position: 37-576
Cow position:
Alignm length: 551
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 67

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 58

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 20

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 64

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 33

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 69

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 71

Conread position: 37-576
Cow position:
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 67

Conread position: 37-576
Cow position:
Alignm length: 552
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 73

Conread position: 37-576
Cow position:
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 54

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 20

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 37-576
Cow position:
Alignm length: 551
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 38-576
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 72

Conread position: 43-266
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 205, 62

Conread position: 43-513
Cow position:
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 43-576
Cow position:
Alignm length: 545
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 67

Conread position: 43-576
Cow position:
Alignm length: 542
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 65

Conread position: 48-576
Cow position:
Alignm length: 539
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 48-576
Cow position:
Alignm length: 541
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 57

Conread position: 49-347
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 49-573
Cow position:
Alignm length: 530
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 61

Conread position: 49-574
Cow position:
Alignm length: 534
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 61

Conread position: 49-575
Cow position:
Alignm length: 536
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 49-576
Cow position:
Alignm length: 543
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 49-576
Cow position:
Alignm length: 536
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 11

Conread position: 49-576
Cow position:
Alignm length: 542
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 27

Conread position: 49-576
Cow position:
Alignm length: 533
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 55

Conread position: 50-576
Cow position:
Alignm length: 537
Alignm identity: 350
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 51

Conread position: 57-417
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 197

Conread position: 68-475
Cow position:
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 71-332
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 33

Conread position: 72-420
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 18

Conread position: 78-576
Cow position:
Alignm length: 507
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 107-422
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 184

Conread position: 113-576
Cow position:
Alignm length: 474
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 278

Conread position: 149-576
Cow position:
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 246

Conread position: 152-576
Cow position:
Alignm length: 433
Alignm identity: 269
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 12

Conread position: 155-321
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 158-576
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 37

Conread position: 158-576
Cow position:
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 236

Conread position: 163-576
Cow position:
Alignm length: 421
Alignm identity: 273
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 141, 18

Conread position: 188-527
Cow position:
Alignm length: 343
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 60

Conread position: 189-576
Cow position:
Alignm length: 395
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 193-576
Cow position:
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 54

Conread position: 219-426
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 113

Conread position: 241-473
Cow position:
Alignm length: 240
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 247-576
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 145

Conread position: 255-576
Cow position:
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 271-576
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 293-575
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 224, 90

Conread position: 325-576
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 191, 66

Conread position: 392-576
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 127, 99

Conread position: 419-576
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.