Cow genome map

Conread name: Lym2-sn78_G06.f

Conread position: 1-576
Cow position:
Alignm length: 587
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 9

Conread position: 2-574
Cow position:
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 103

Conread position: 4-448
Cow position:
Alignm length: 451
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 4-486
Cow position:
Alignm length: 496
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 84

Conread position: 4-531
Cow position:
Alignm length: 538
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 4-559
Cow position:
Alignm length: 564
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 4-574
Cow position:
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 30

Conread position: 4-576
Cow position:
Alignm length: 581
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 15

Conread position: 4-576
Cow position:
Alignm length: 584
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 104

Conread position: 4-576
Cow position:
Alignm length: 594
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 107

Conread position: 5-372
Cow position:
Alignm length: 377
Alignm identity: 247
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 37

Conread position: 5-434
Cow position:
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 100

Conread position: 5-553
Cow position:
Alignm length: 553
Alignm identity: 360
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 27

Conread position: 6-415
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 112

Conread position: 6-551
Cow position:
Alignm length: 558
Alignm identity: 348
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 40

Conread position: 8-251
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 22

Conread position: 8-555
Cow position:
Alignm length: 555
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 32

Conread position: 8-565
Cow position:
Alignm length: 584
Alignm identity: 374
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 52

Conread position: 9-199
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 30, 80

Conread position: 9-284
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 39, 101

Conread position: 9-575
Cow position:
Alignm length: 585
Alignm identity: 374
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 49, 33

Conread position: 9-576
Cow position:
Alignm length: 582
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 99

Conread position: 9-576
Cow position:
Alignm length: 575
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 107

Conread position: 9-576
Cow position:
Alignm length: 575
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 33

Conread position: 10-550
Cow position:
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 101

Conread position: 12-184
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 11

Conread position: 12-574
Cow position:
Alignm length: 572
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 25

Conread position: 18-314
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 129, 31

Conread position: 18-414
Cow position:
Alignm length: 409
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 18-576
Cow position:
Alignm length: 567
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 84

Conread position: 18-576
Cow position:
Alignm length: 569
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 19-567
Cow position:
Alignm length: 557
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 83

Conread position: 23-576
Cow position:
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 36-576
Cow position:
Alignm length: 551
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 69

Conread position: 37-203
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 65

Conread position: 37-238
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 65

Conread position: 37-257
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 208

Conread position: 37-266
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 117, 64

Conread position: 37-274
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 110, 69

Conread position: 37-286
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 107, 73

Conread position: 37-286
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 107, 73

Conread position: 37-382
Cow position:
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 56

Conread position: 37-413
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 73

Conread position: 37-426
Cow position:
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 29

Conread position: 37-433
Cow position:
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 64

Conread position: 37-437
Cow position:
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 68

Conread position: 37-441
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-442
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 41

Conread position: 37-473
Cow position:
Alignm length: 447
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-478
Cow position:
Alignm length: 447
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-542
Cow position:
Alignm length: 516
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 62

Conread position: 37-575
Cow position:
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 77

Conread position: 37-575
Cow position:
Alignm length: 554
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 69

Conread position: 37-576
Cow position:
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 58

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 62

Conread position: 37-576
Cow position:
Alignm length: 557
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 65

Conread position: 37-576
Cow position:
Alignm length: 547
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 11

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 556
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 67

Conread position: 37-576
Cow position:
Alignm length: 552
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 69

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 215

Conread position: 37-576
Cow position:
Alignm length: 554
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 65

Conread position: 37-576
Cow position:
Alignm length: 562
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 67

Conread position: 37-576
Cow position:
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 70

Conread position: 37-576
Cow position:
Alignm length: 554
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 64

Conread position: 37-576
Cow position:
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 57

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 41

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 38

Conread position: 37-576
Cow position:
Alignm length: 560
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 38-282
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 105, 11

Conread position: 38-381
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 60

Conread position: 38-381
Cow position:
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 60

Conread position: 40-441
Cow position:
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 68

Conread position: 40-575
Cow position:
Alignm length: 539
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 64

Conread position: 40-576
Cow position:
Alignm length: 557
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 64

Conread position: 40-576
Cow position:
Alignm length: 552
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 62

Conread position: 40-576
Cow position:
Alignm length: 552
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 62

Conread position: 42-576
Cow position:
Alignm length: 545
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 12

Conread position: 42-576
Cow position:
Alignm length: 549
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 8

Conread position: 43-405
Cow position:
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 65

Conread position: 43-544
Cow position:
Alignm length: 518
Alignm identity: 333
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 12

Conread position: 43-574
Cow position:
Alignm length: 542
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 65

Conread position: 43-576
Cow position:
Alignm length: 538
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 65

Conread position: 43-576
Cow position:
Alignm length: 544
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 65

Conread position: 43-576
Cow position:
Alignm length: 543
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 58

Conread position: 43-576
Cow position:
Alignm length: 535
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 37

Conread position: 44-500
Cow position:
Alignm length: 463
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 64

Conread position: 45-421
Cow position:
Alignm length: 384
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 67, 53

Conread position: 49-571
Cow position:
Alignm length: 530
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 55

Conread position: 52-576
Cow position:
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 5

Conread position: 63-575
Cow position:
Alignm length: 515
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 45

Conread position: 68-574
Cow position:
Alignm length: 522
Alignm identity: 342
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 24

Conread position: 94-576
Cow position:
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 107-422
Cow position:
Alignm length: 320
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 37

Conread position: 151-567
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 7

Conread position: 151-576
Cow position:
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 7

Conread position: 153-574
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 236

Conread position: 157-486
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 24

Conread position: 164-551
Cow position:
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 133

Conread position: 167-576
Cow position:
Alignm length: 416
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 174-576
Cow position:
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 77

Conread position: 187-514
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 276, 80

Conread position: 192-567
Cow position:
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 83

Conread position: 200-575
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 51

Conread position: 210-356
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 216-576
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 24

Conread position: 217-576
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 12

Conread position: 220-560
Cow position:
Alignm length: 345
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 29

Conread position: 225-574
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 148

Conread position: 232-576
Cow position:
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 233-576
Cow position:
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 244-576
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 140

Conread position: 395-576
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 39

Conread position: 403-576
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 430-576
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.