Cow genome map

Conread name: Lym2-sn78_G06.f

Conread position: 1-254
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 110

Conread position: 1-441
Cow position:
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 4-185
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 158, 38

Conread position: 4-205
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 4-363
Cow position:
Alignm length: 371
Alignm identity: 240
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 83

Conread position: 4-381
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 100

Conread position: 4-418
Cow position:
Alignm length: 444
Alignm identity: 302
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 103

Conread position: 4-448
Cow position:
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 4-574
Cow position:
Alignm length: 585
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 104

Conread position: 4-576
Cow position:
Alignm length: 581
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 4-576
Cow position:
Alignm length: 603
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 4-576
Cow position:
Alignm length: 586
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 99

Conread position: 4-576
Cow position:
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 4-576
Cow position:
Alignm length: 588
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 5-576
Cow position:
Alignm length: 583
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 100

Conread position: 6-259
Cow position:
Alignm length: 256
Alignm identity: 168
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 136, 96

Conread position: 6-576
Cow position:
Alignm length: 587
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 6-576
Cow position:
Alignm length: 590
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 36

Conread position: 8-575
Cow position:
Alignm length: 582
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 94

Conread position: 9-571
Cow position:
Alignm length: 575
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 100

Conread position: 9-573
Cow position:
Alignm length: 574
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 10-576
Cow position:
Alignm length: 576
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 102

Conread position: 13-567
Cow position:
Alignm length: 571
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 13-576
Cow position:
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 96

Conread position: 13-576
Cow position:
Alignm length: 581
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 96

Conread position: 18-571
Cow position:
Alignm length: 572
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 93

Conread position: 18-574
Cow position:
Alignm length: 571
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 91

Conread position: 18-576
Cow position:
Alignm length: 586
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 24

Conread position: 18-576
Cow position:
Alignm length: 569
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 31

Conread position: 19-343
Cow position:
Alignm length: 331
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 89

Conread position: 19-573
Cow position:
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 23-575
Cow position:
Alignm length: 565
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 86

Conread position: 35-565
Cow position:
Alignm length: 542
Alignm identity: 338
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 71

Conread position: 36-455
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 68

Conread position: 36-455
Cow position:
Alignm length: 437
Alignm identity: 277
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 94, 72

Conread position: 36-567
Cow position:
Alignm length: 539
Alignm identity: 360
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 17

Conread position: 37-187
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 65

Conread position: 37-212
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 37-242
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 67

Conread position: 37-299
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 211, 71

Conread position: 37-337
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 68

Conread position: 37-341
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 71

Conread position: 37-367
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 45

Conread position: 37-381
Cow position:
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-386
Cow position:
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-428
Cow position:
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-441
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 74

Conread position: 37-456
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-458
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 67

Conread position: 37-468
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 68

Conread position: 37-573
Cow position:
Alignm length: 545
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 68

Conread position: 37-573
Cow position:
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-573
Cow position:
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-574
Cow position:
Alignm length: 549
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 557
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 68

Conread position: 37-576
Cow position:
Alignm length: 555
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 71

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 67

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 37-576
Cow position:
Alignm length: 543
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 71

Conread position: 37-576
Cow position:
Alignm length: 551
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position:
Alignm length: 546
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 65

Conread position: 37-576
Cow position:
Alignm length: 548
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 71

Conread position: 37-576
Cow position:
Alignm length: 560
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 37-576
Cow position:
Alignm length: 552
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 58

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 69

Conread position: 37-576
Cow position:
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 67

Conread position: 37-576
Cow position:
Alignm length: 552
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 68

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 73

Conread position: 37-576
Cow position:
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 37-576
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 15

Conread position: 37-576
Cow position:
Alignm length: 549
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 68

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 68

Conread position: 37-576
Cow position:
Alignm length: 550
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 38-381
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 67

Conread position: 38-433
Cow position:
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 64

Conread position: 40-199
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 62

Conread position: 40-513
Cow position:
Alignm length: 485
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 362

Conread position: 43-374
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 65

Conread position: 43-576
Cow position:
Alignm length: 544
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 62

Conread position: 43-576
Cow position:
Alignm length: 547
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 65

Conread position: 43-576
Cow position:
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 61

Conread position: 44-274
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 60

Conread position: 44-576
Cow position:
Alignm length: 547
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 48-575
Cow position:
Alignm length: 538
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 56

Conread position: 48-576
Cow position:
Alignm length: 534
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 58

Conread position: 49-319
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 59

Conread position: 50-576
Cow position:
Alignm length: 536
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 55

Conread position: 52-576
Cow position:
Alignm length: 547
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 50

Conread position: 55-574
Cow position:
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 46

Conread position: 59-193
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 44

Conread position: 68-576
Cow position:
Alignm length: 519
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 72-361
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 71, 28

Conread position: 85-566
Cow position:
Alignm length: 487
Alignm identity: 300
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 20

Conread position: 93-576
Cow position:
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 96-574
Cow position:
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 132-576
Cow position:
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 241

Conread position: 152-576
Cow position:
Alignm length: 431
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 229

Conread position: 157-386
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 88

Conread position: 159-576
Cow position:
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 51

Conread position: 164-575
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 349, 95

Conread position: 165-567
Cow position:
Alignm length: 414
Alignm identity: 271
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 118, 11

Conread position: 190-576
Cow position:
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 156

Conread position: 191-575
Cow position:
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 197

Conread position: 194-441
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 152

Conread position: 195-576
Cow position:
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 202-575
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 6

Conread position: 223-466
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 15

Conread position: 241-576
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 9

Conread position: 250-478
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 25

Conread position: 250-576
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 41, 74

Conread position: 255-567
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 34

Conread position: 271-514
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 17, 121

Conread position: 272-576
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 121

Conread position: 273-528
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 111

Conread position: 279-576
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 98

Conread position: 282-573
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 345-576
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 174, 47

Conread position: 366-574
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 399-576
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 0

Show alignments to all cow chromosomes.