Cow genome map

Conread name: MPL-MPL384_11_C22

Conread position: 1-259
Cow position: chr1:59626449-59626183 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 63

Conread position: 1-294
Cow position: chr1:73756623-73756343 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 40

Conread position: 1-295
Cow position: chr1:70933828-70934133 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 15

Conread position: 1-306
Cow position: chr1:22227392-22227076 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 61

Conread position: 1-306
Cow position: chr1:25553594-25553273 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 1-308
Cow position: chr1:24909789-24910099 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 1-312
Cow position: chr1:57390830-57391143 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 48

Conread position: 1-317
Cow position: chr1:42175105-42174772 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-320
Cow position: chr1:92433552-92433238 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 32

Conread position: 1-323
Cow position: chr1:38688006-38687678 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-324
Cow position: chr1:102784313-102783979 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 30

Conread position: 1-326
Cow position: chr1:8515049-8514725 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 1-330
Cow position: chr1:80063083-80062762 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-331
Cow position: chr1:81859683-81860026 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 63

Conread position: 1-333
Cow position: chr1:63601996-63602345 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-334
Cow position: chr1:14240276-14240625 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 53

Conread position: 1-334
Cow position: chr1:50764924-50764589 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-334
Cow position: chr1:68951174-68950846 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 153, 65

Conread position: 1-335
Cow position: chr1:24780694-24781039 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 45

Conread position: 1-335
Cow position: chr1:63240496-63240134 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 78

Conread position: 1-335
Cow position: chr1:66491369-66491021 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:8602186-8602536 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 1-336
Cow position: chr1:11854159-11854510 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 108

Conread position: 1-336
Cow position: chr1:12057462-12057809 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:16116607-16116959 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:19828203-19828544 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:20544014-20543668 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 1-336
Cow position: chr1:21257820-21258162 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 39

Conread position: 1-336
Cow position: chr1:22790188-22789844 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:28176550-28176193 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 37, 95

Conread position: 1-336
Cow position: chr1:28413053-28413393 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 47

Conread position: 1-336
Cow position: chr1:28876887-28876537 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:29429396-29429044 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:30372683-30372334 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:30785751-30786086 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:32562747-32563095 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr1:32795971-32795641 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:33547608-33547961 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-336
Cow position: chr1:40310536-40310199 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 34, 26

Conread position: 1-336
Cow position: chr1:47923076-47923421 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:52354882-52355232 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:55043473-55043824 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 53

Conread position: 1-336
Cow position: chr1:55780660-55780309 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:56190627-56190979 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:57396550-57396882 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-336
Cow position: chr1:57678592-57678939 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 53

Conread position: 1-336
Cow position: chr1:59483075-59483423 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:61221210-61220870 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:63046673-63046325 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:63049357-63049018 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:65390353-65389997 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:66971380-66971720 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:67078035-67078387 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-336
Cow position: chr1:68845924-68846278 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 62

Conread position: 1-336
Cow position: chr1:68854723-68854391 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 1-336
Cow position: chr1:68869746-68869406 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 64

Conread position: 1-336
Cow position: chr1:69963518-69963865 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:70865035-70864686 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr1:72087375-72087039 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 53

Conread position: 1-336
Cow position: chr1:72114927-72114580 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:72806226-72806567 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:74302331-74302672 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 61

Conread position: 1-336
Cow position: chr1:76617697-76618035 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr1:82920349-82920702 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 1-336
Cow position: chr1:87831033-87830688 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:88327692-88328047 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 1-336
Cow position: chr1:89089745-89090097 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:90913619-90913269 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 54

Conread position: 1-336
Cow position: chr1:93858304-93857962 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:94663445-94663093 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:98789642-98789294 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 62

Conread position: 1-336
Cow position: chr1:99837555-99837911 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr1:100590982-100591333 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr1:100887715-100888068 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 1-337
Cow position: chr1:6196488-6196840 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-337
Cow position: chr1:72812947-72812598 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-338
Cow position: chr1:71691345-71690991 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-350
Cow position: chr1:85142423-85142792 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-352
Cow position: chr1:16573152-16573504 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 56

Conread position: 1-354
Cow position: chr1:5505730-5505357 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr1:31350979-31351350 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-354
Cow position: chr1:58340706-58340333 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-354
Cow position: chr1:76748603-76748973 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr1:78291349-78290976 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr1:97075711-97076082 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 1-355
Cow position: chr1:58419456-58419089 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 66

Conread position: 1-356
Cow position: chr1:43650121-43650489 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-357
Cow position: chr1:7197132-7196770 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr1:16337314-16337677 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr1:25119501-25119862 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 34, 62

Conread position: 1-357
Cow position: chr1:32360616-32360978 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 40, 9

Conread position: 1-357
Cow position: chr1:33392807-33392434 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 47

Conread position: 1-357
Cow position: chr1:40292363-40292724 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 62

Conread position: 1-357
Cow position: chr1:51980757-51980391 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 1-357
Cow position: chr1:54117018-54116661 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 53

Conread position: 1-357
Cow position: chr1:58439505-58439883 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr1:81363063-81362696 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 33

Conread position: 1-357
Cow position: chr1:92196765-92196392 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-357
Cow position: chr1:95655158-95655518 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 53

Conread position: 1-357
Cow position: chr1:98559704-98559329 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 1-360
Cow position: chr1:39112497-39112121 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 63

Conread position: 1-361
Cow position: chr1:19145399-19145754 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 63

Conread position: 1-361
Cow position: chr1:27495029-27494652 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 62

Conread position: 1-361
Cow position: chr1:57362541-57362922 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 1-362
Cow position: chr1:3340453-3340084 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 69

Conread position: 1-362
Cow position: chr1:39702311-39701914 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 65

Conread position: 1-362
Cow position: chr1:40089158-40088787 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 62

Conread position: 1-362
Cow position: chr1:51393952-51393594 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 155, 36

Conread position: 1-362
Cow position: chr1:52507830-52508210 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-362
Cow position: chr1:56619154-56619535 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 69

Conread position: 1-362
Cow position: chr1:57246893-57246511 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 54

Conread position: 1-362
Cow position: chr1:81356502-81356884 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr1:12465240-12465605 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 1-363
Cow position: chr1:23117418-23117798 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr1:31238392-31238779 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 1-363
Cow position: chr1:53308866-53309249 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 70

Conread position: 1-363
Cow position: chr1:53520438-53520072 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 1-363
Cow position: chr1:57636404-57636021 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr1:58192014-58192396 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr1:59019305-59018932 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 1-363
Cow position: chr1:73761759-73762135 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-363
Cow position: chr1:77461922-77461543 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-364
Cow position: chr1:22253850-22253484 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 36

Conread position: 1-364
Cow position: chr1:23099418-23099046 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-365
Cow position: chr1:61283211-61282832 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 2-333
Cow position: chr1:42554786-42554447 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 62

Conread position: 2-336
Cow position: chr1:19517642-19517998 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 63

Conread position: 2-336
Cow position: chr1:20001222-20001561 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 2-336
Cow position: chr1:31515357-31515674 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 153, 22

Conread position: 2-336
Cow position: chr1:39234716-39235063 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-336
Cow position: chr1:72306567-72306913 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-336
Cow position: chr1:82880215-82879871 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-336
Cow position: chr1:88338221-88337883 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 62

Conread position: 2-336
Cow position: chr1:89185674-89186024 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 2-338
Cow position: chr1:4226773-4226434 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 157, 67

Conread position: 2-354
Cow position: chr1:29915943-29915588 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 62

Conread position: 2-356
Cow position: chr1:38418604-38418238 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 52

Conread position: 2-357
Cow position: chr1:28677836-28677471 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-357
Cow position: chr1:57120043-57120422 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 64

Conread position: 2-362
Cow position: chr1:24581171-24580817 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 2-363
Cow position: chr1:42053793-42054165 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-363
Cow position: chr1:77620076-77619696 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 2-363
Cow position: chr1:95018278-95018658 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 22, 7

Conread position: 2-363
Cow position: chr1:95474119-95474492 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 2-364
Cow position: chr1:53650437-53650062 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-366
Cow position: chr1:67013787-67013423 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 68

Conread position: 3-335
Cow position: chr1:53494984-53494648 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 63

Conread position: 3-336
Cow position: chr1:31039299-31039623 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 42

Conread position: 3-336
Cow position: chr1:80901705-80902037 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 61

Conread position: 3-356
Cow position: chr1:85338641-85338278 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 139, 34

Conread position: 3-357
Cow position: chr1:71081059-71081427 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 3-360
Cow position: chr1:79255782-79255398 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 103

Conread position: 3-361
Cow position: chr1:66242276-66242649 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 3-362
Cow position: chr1:58196664-58197043 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 3-363
Cow position: chr1:52434812-52434436 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 61

Conread position: 3-363
Cow position: chr1:82091684-82091304 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 3-367
Cow position: chr1:99571805-99572156 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 4-335
Cow position: chr1:20098875-20098539 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 4-336
Cow position: chr1:23370775-23371120 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 4-336
Cow position: chr1:55327455-55327797 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 4-357
Cow position: chr1:76303869-76304223 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 46

Conread position: 4-357
Cow position: chr1:85838623-85838266 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 61, 88

Conread position: 4-363
Cow position: chr1:57573808-57574177 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 60

Conread position: 4-363
Cow position: chr1:68783130-68783504 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 50

Conread position: 4-366
Cow position: chr1:64717107-64717485 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 66

Conread position: 5-336
Cow position: chr1:67290400-67290057 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 59

Conread position: 6-357
Cow position: chr1:95765606-95765963 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 39, 58

Conread position: 7-331
Cow position: chr1:52054609-52054266 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 8-310
Cow position: chr1:76020155-76020475 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 8-363
Cow position: chr1:70380630-70381005 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 32

Conread position: 9-357
Cow position: chr1:4452303-4452669 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 29, 58

Conread position: 9-363
Cow position: chr1:88028595-88028232 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 36

Conread position: 12-352
Cow position: chr1:30495335-30494981 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 12-357
Cow position: chr1:10067681-10068047 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 12-363
Cow position: chr1:100421365-100421008 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 13-326
Cow position: chr1:77657315-77656999 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 50

Conread position: 13-336
Cow position: chr1:3930561-3930900 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 46

Conread position: 13-336
Cow position: chr1:34685244-34684940 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 52

Conread position: 13-354
Cow position: chr1:38712493-38712131 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 16-336
Cow position: chr1:80974454-80974789 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 16-358
Cow position: chr1:56232411-56232067 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 12

Conread position: 16-363
Cow position: chr1:85773981-85773615 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 17-337
Cow position: chr1:101834149-101833834 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 47

Conread position: 18-288
Cow position: chr1:2076030-2075765 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 20-358
Cow position: chr1:26446914-26446575 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 20-361
Cow position: chr1:99117783-99117429 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 44

Conread position: 22-298
Cow position: chr1:85152271-85151980 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 42

Conread position: 23-336
Cow position: chr1:102552753-102552443 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 40

Conread position: 26-363
Cow position: chr1:44836750-44837108 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 38

Conread position: 37-363
Cow position: chr1:61746426-61746772 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 25

Conread position: 37-363
Cow position: chr1:71792689-71792339 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 39-353
Cow position: chr1:38544963-38545300 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 117, 25

Conread position: 40-336
Cow position: chr1:5013046-5013358 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 116, 29

Conread position: 40-360
Cow position: chr1:29380181-29380504 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 116, 23

Conread position: 42-354
Cow position: chr1:13438845-13438538 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 21

Conread position: 44-357
Cow position: chr1:19483505-19483830 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 19

Conread position: 44-357
Cow position: chr1:42057332-42057009 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 112, 19

Conread position: 45-357
Cow position: chr1:44078676-44079004 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 18

Conread position: 48-336
Cow position: chr1:98535358-98535057 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 15

Conread position: 48-363
Cow position: chr1:44229959-44229625 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 15

Conread position: 52-355
Cow position: chr1:51967982-51967664 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 57-362
Cow position: chr1:24595325-24595005 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 6

Conread position: 72-336
Cow position: chr1:4375083-4375359 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 84, 19

Conread position: 75-336
Cow position: chr1:34857984-34858251 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 12

Conread position: 77-357
Cow position: chr1:22480949-22481242 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 9

Conread position: 78-336
Cow position: chr1:31351924-31352193 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 13

Conread position: 81-336
Cow position: chr1:79453049-79453320 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 75, 62

Conread position: 82-338
Cow position: chr1:38479322-38479050 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 74, 15

Conread position: 86-363
Cow position: chr1:102290145-102290443 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 19

Conread position: 87-362
Cow position: chr1:71666767-71667061 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 18

Conread position: 88-333
Cow position: chr1:10005289-10005546 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 17

Conread position: 91-336
Cow position: chr1:44678325-44678090 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 15

Conread position: 91-336
Cow position: chr1:61342009-61342266 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 14

Conread position: 91-336
Cow position: chr1:71045207-71044940 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 16

Conread position: 91-363
Cow position: chr1:100536859-100536558 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 16

Conread position: 92-336
Cow position: chr1:61747757-61748012 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 13

Conread position: 103-336
Cow position: chr1:99917131-99916879 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 40

Conread position: 105-336
Cow position: chr1:39889766-39889519 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 51, 38

Conread position: 106-336
Cow position: chr1:13579091-13579338 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 37

Conread position: 106-336
Cow position: chr1:63044472-63044718 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 37

Conread position: 106-363
Cow position: chr1:86574516-86574237 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 36

Conread position: 106-367
Cow position: chr1:53372053-53371773 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 37

Conread position: 107-358
Cow position: chr1:42874977-42875247 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 36

Conread position: 120-333
Cow position: chr1:46821287-46821056 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 23

Conread position: 128-336
Cow position: chr1:25052922-25053147 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 15

Conread position: 130-305
Cow position: chr1:21459773-21459586 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 11

Conread position: 140-360
Cow position: chr1:29461982-29461745 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 157

Conread position: 142-304
Cow position: chr1:61728346-61728519 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 22

Conread position: 142-335
Cow position: chr1:85163661-85163876 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 143-326
Cow position: chr1:60033267-60033464 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 123

Conread position: 143-336
Cow position: chr1:57946585-57946370 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 143-363
Cow position: chr1:24655481-24655240 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 138

Conread position: 143-363
Cow position: chr1:52371624-52371382 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 6

Conread position: 145-333
Cow position: chr1:96390638-96390838 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 145-357
Cow position: chr1:12468148-12468377 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 122

Conread position: 158-336
Cow position: chr1:21507455-21507648 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 159-354
Cow position: chr1:73063706-73063919 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 159-363
Cow position: chr1:72139827-72139605 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 182-336
Cow position: chr1:21132258-21132416 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 44

Conread position: 190-357
Cow position: chr1:24921920-24922093 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 192-336
Cow position: chr1:90622642-90622793 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 120

Conread position: 194-329
Cow position: chr1:100435895-100435758 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 194-336
Cow position: chr1:5162757-5162899 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 51

Conread position: 195-335
Cow position: chr1:56475582-56475436 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 195-336
Cow position: chr1:3382732-3382879 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 195-336
Cow position: chr1:15049389-15049249 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 50

Conread position: 195-336
Cow position: chr1:30079527-30079381 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 195-336
Cow position: chr1:42740283-42740136 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 195-336
Cow position: chr1:55203321-55203471 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 195-336
Cow position: chr1:56631957-56631818 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 52

Conread position: 195-336
Cow position: chr1:70051807-70051667 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 57

Conread position: 195-336
Cow position: chr1:74939310-74939172 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 57

Conread position: 195-336
Cow position: chr1:82163210-82163357 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 195-336
Cow position: chr1:89484678-89484532 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 115

Conread position: 195-336
Cow position: chr1:100451092-100451234 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 104

Conread position: 195-338
Cow position: chr1:102431156-102431300 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 131

Conread position: 195-362
Cow position: chr1:44127266-44127431 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 15, 53

Conread position: 195-363
Cow position: chr1:6765515-6765693 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 195-363
Cow position: chr1:16973536-16973702 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 58

Conread position: 195-363
Cow position: chr1:19793286-19793113 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 143

Conread position: 195-373
Cow position: chr1:22525199-22525016 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 95

Conread position: 198-336
Cow position: chr1:86505769-86505914 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 198-361
Cow position: chr1:56746468-56746295 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 198-363
Cow position: chr1:79002538-79002716 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 202-356
Cow position: chr1:92279246-92279400 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 44

Conread position: 202-357
Cow position: chr1:37323703-37323868 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 202-360
Cow position: chr1:19049689-19049853 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 202-362
Cow position: chr1:91889828-91889990 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 203-357
Cow position: chr1:70387751-70387911 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 205-363
Cow position: chr1:9438719-9438881 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 5, 101

Conread position: 206-349
Cow position: chr1:11728312-11728167 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 121

Conread position: 218-357
Cow position: chr1:70534906-70535048 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 6

Conread position: 221-363
Cow position: chr1:43448951-43449100 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 52

Conread position: 227-363
Cow position: chr1:40532336-40532474 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 21

Conread position: 235-363
Cow position: chr1:51444783-51444654 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 103, 11

Conread position: 247-363
Cow position: chr1:72864474-72864355 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 249-336
Cow position: chr1:79843700-79843613 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.