Cow genome map

Conread name: MPL-MPL384_11_C22

Conread position: 1-238
Cow position: chr16:24445778-24445544 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 69

Conread position: 1-258
Cow position: chr16:54294527-54294267 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 63

Conread position: 1-276
Cow position: chr16:51578873-51579158 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 63

Conread position: 1-293
Cow position: chr16:49529054-49529335 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 63

Conread position: 1-298
Cow position: chr16:30143915-30144209 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 12

Conread position: 1-306
Cow position: chr16:10202879-10203196 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 46

Conread position: 1-306
Cow position: chr16:23472277-23471958 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-306
Cow position: chr16:25483887-25483570 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 53

Conread position: 1-312
Cow position: chr16:16596791-16596463 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 64

Conread position: 1-320
Cow position: chr16:23027771-23027443 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 63

Conread position: 1-332
Cow position: chr16:2724168-2724516 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-333
Cow position: chr16:23737708-23737379 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 61

Conread position: 1-334
Cow position: chr16:20475759-20475410 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 37, 66

Conread position: 1-334
Cow position: chr16:29158656-29158318 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-335
Cow position: chr16:11632788-11633139 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 16

Conread position: 1-335
Cow position: chr16:17142451-17142107 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 26

Conread position: 1-335
Cow position: chr16:25345029-25344684 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 25

Conread position: 1-335
Cow position: chr16:45551391-45551053 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 62

Conread position: 1-335
Cow position: chr16:46552330-46551999 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-336
Cow position: chr16:825526-825177 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-336
Cow position: chr16:1563331-1563684 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:1734792-1734443 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:2480104-2480451 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 1-336
Cow position: chr16:3768952-3769304 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:4078906-4079254 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr16:4461272-4461624 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:4712425-4712076 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 62

Conread position: 1-336
Cow position: chr16:6379584-6379935 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 8

Conread position: 1-336
Cow position: chr16:14040481-14040129 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr16:14441411-14441086 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 69

Conread position: 1-336
Cow position: chr16:15188111-15187768 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 16

Conread position: 1-336
Cow position: chr16:15979322-15979674 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:22798657-22799000 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr16:24240345-24240696 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:25444932-25444580 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:26671081-26671426 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr16:28468067-28468419 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:30638855-30638512 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 43, 63

Conread position: 1-336
Cow position: chr16:38177817-38177468 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 87, 30

Conread position: 1-336
Cow position: chr16:39033296-39033641 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:41576275-41575947 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr16:42733235-42733582 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:45532250-45532590 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 188, 62

Conread position: 1-336
Cow position: chr16:45683742-45683391 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 34

Conread position: 1-336
Cow position: chr16:49126659-49127004 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr16:49169834-49170177 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-336
Cow position: chr16:50190065-50190414 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 64

Conread position: 1-336
Cow position: chr16:51641307-51640951 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr16:52527284-52526935 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr16:54231297-54231644 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:56149834-56149487 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr16:56913187-56913534 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 52

Conread position: 1-339
Cow position: chr16:52855809-52856143 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-354
Cow position: chr16:23986369-23985996 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr16:48411700-48411318 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 63

Conread position: 1-357
Cow position: chr16:16096264-16095881 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr16:18949131-18948763 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 54

Conread position: 1-357
Cow position: chr16:39616271-39615902 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-357
Cow position: chr16:43894207-43894581 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-361
Cow position: chr16:25454422-25454786 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-362
Cow position: chr16:600467-600096 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 27

Conread position: 1-362
Cow position: chr16:9786372-9785990 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-362
Cow position: chr16:14758240-14757866 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 62

Conread position: 1-362
Cow position: chr16:25174290-25173919 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-362
Cow position: chr16:43770093-43770481 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 68

Conread position: 1-362
Cow position: chr16:43986650-43987022 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 1-362
Cow position: chr16:47518373-47517989 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 71

Conread position: 1-362
Cow position: chr16:49515729-49516107 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 1-363
Cow position: chr16:1957682-1958053 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 21

Conread position: 1-363
Cow position: chr16:2962801-2963183 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr16:14722216-14722588 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr16:28206056-28206439 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 1-363
Cow position: chr16:31426107-31425732 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 1-363
Cow position: chr16:42745424-42745810 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 1-363
Cow position: chr16:44676411-44676028 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 63

Conread position: 1-363
Cow position: chr16:49142014-49142399 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-363
Cow position: chr16:49253214-49253578 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 193, 37

Conread position: 1-363
Cow position: chr16:51087837-51087457 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 49

Conread position: 1-363
Cow position: chr16:53621787-53622168 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 58

Conread position: 1-363
Cow position: chr16:54298011-54297641 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 68

Conread position: 1-366
Cow position: chr16:2232664-2233055 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 97

Conread position: 1-368
Cow position: chr16:14662067-14662456 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 2-334
Cow position: chr16:23872127-23872460 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 37

Conread position: 2-334
Cow position: chr16:44667811-44668142 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 154, 46

Conread position: 2-336
Cow position: chr16:192884-193234 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 2-336
Cow position: chr16:840324-839975 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 2-336
Cow position: chr16:4972502-4972823 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 35, 61

Conread position: 2-336
Cow position: chr16:5435880-5435529 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-336
Cow position: chr16:18678721-18678381 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-336
Cow position: chr16:30052988-30052649 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 35, 62

Conread position: 2-336
Cow position: chr16:42079315-42079652 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 2-354
Cow position: chr16:5350453-5350825 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-356
Cow position: chr16:46223455-46223830 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 154, 29

Conread position: 2-357
Cow position: chr16:15805356-15804987 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 29

Conread position: 2-357
Cow position: chr16:20205035-20204680 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 62

Conread position: 2-363
Cow position: chr16:19062889-19062510 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-363
Cow position: chr16:45534508-45534136 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-363
Cow position: chr16:47017713-47018080 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 2-363
Cow position: chr16:48494861-48495244 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 2-366
Cow position: chr16:48341154-48341538 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 2-367
Cow position: chr16:24673987-24673623 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 62

Conread position: 3-331
Cow position: chr16:32838018-32838361 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 61

Conread position: 3-357
Cow position: chr16:53225280-53225664 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 38

Conread position: 6-336
Cow position: chr16:7467658-7467312 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 6-336
Cow position: chr16:43813599-43813260 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 48

Conread position: 8-357
Cow position: chr16:28022021-28022392 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 12-292
Cow position: chr16:48659387-48659104 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 55

Conread position: 12-333
Cow position: chr16:19409312-19409648 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 41

Conread position: 12-341
Cow position: chr16:45157925-45158273 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 52

Conread position: 12-355
Cow position: chr16:24147685-24147334 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 12-363
Cow position: chr16:45609454-45609083 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 54

Conread position: 12-363
Cow position: chr16:47773300-47772938 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 12-364
Cow position: chr16:25893545-25893182 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 51

Conread position: 13-333
Cow position: chr16:5895474-5895140 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 13-336
Cow position: chr16:12160249-12160579 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 13-336
Cow position: chr16:46101576-46101915 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 13-336
Cow position: chr16:51043145-51042809 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 13-363
Cow position: chr16:340770-340434 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 23

Conread position: 16-336
Cow position: chr16:10441279-10440943 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 48

Conread position: 16-357
Cow position: chr16:54228242-54228609 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 22, 47

Conread position: 16-361
Cow position: chr16:14029115-14029485 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 48

Conread position: 19-357
Cow position: chr16:27013428-27013077 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 45

Conread position: 20-336
Cow position: chr16:26389519-26389194 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 44

Conread position: 22-352
Cow position: chr16:43801369-43801715 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 44

Conread position: 24-336
Cow position: chr16:702282-701963 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 40

Conread position: 31-370
Cow position: chr16:1223637-1223992 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 128, 32

Conread position: 40-336
Cow position: chr16:14570591-14570296 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 118, 23

Conread position: 40-366
Cow position: chr16:9417872-9417535 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 114, 19

Conread position: 42-363
Cow position: chr16:44972732-44973073 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 103, 21

Conread position: 44-361
Cow position: chr16:49509806-49510142 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 87, 19

Conread position: 66-336
Cow position: chr16:3027402-3027136 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 25

Conread position: 67-357
Cow position: chr16:18205221-18204908 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 89, 24

Conread position: 69-335
Cow position: chr16:41834854-41834571 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 87, 38

Conread position: 69-366
Cow position: chr16:49577961-49577649 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 15

Conread position: 70-357
Cow position: chr16:24229223-24228921 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 86, 21

Conread position: 72-336
Cow position: chr16:23810497-23810221 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 19

Conread position: 74-336
Cow position: chr16:25157425-25157702 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 17

Conread position: 78-336
Cow position: chr16:23563412-23563152 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 116, 13

Conread position: 91-336
Cow position: chr16:21018525-21018263 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 14

Conread position: 94-336
Cow position: chr16:37670545-37670804 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 62, 11

Conread position: 96-324
Cow position: chr16:49188309-49188544 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 60, 9

Conread position: 96-363
Cow position: chr16:15369953-15369665 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 60, 9

Conread position: 99-363
Cow position: chr16:22320328-22320615 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 8, 45

Conread position: 105-357
Cow position: chr16:8367773-8368046 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 38

Conread position: 105-362
Cow position: chr16:48956045-48955775 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 41

Conread position: 105-363
Cow position: chr16:56916174-56916422 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 38

Conread position: 106-336
Cow position: chr16:15570718-15570474 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 37

Conread position: 106-363
Cow position: chr16:4427043-4426764 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 37

Conread position: 110-334
Cow position: chr16:27730433-27730675 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 23

Conread position: 129-362
Cow position: chr16:25169155-25168902 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 17

Conread position: 137-336
Cow position: chr16:42073969-42074194 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 143-352
Cow position: chr16:18616835-18617065 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 143-357
Cow position: chr16:3632981-3632746 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 153-357
Cow position: chr16:28267812-28268036 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 135

Conread position: 159-363
Cow position: chr16:2395281-2395055 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 183-363
Cow position: chr16:49219094-49219278 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 68, 172

Conread position: 185-363
Cow position: chr16:29679837-29680012 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 9

Conread position: 194-336
Cow position: chr16:16543292-16543156 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 194-336
Cow position: chr16:42254468-42254614 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 18

Conread position: 194-336
Cow position: chr16:44689313-44689456 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 194-363
Cow position: chr16:25964751-25964577 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 195-306
Cow position: chr16:33131386-33131272 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 195-328
Cow position: chr16:12087711-12087848 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 195-336
Cow position: chr16:12737132-12736984 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 195-336
Cow position: chr16:14351832-14351980 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 195-357
Cow position: chr16:39416161-39416333 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 195-363
Cow position: chr16:7541332-7541156 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 195-363
Cow position: chr16:8871590-8871769 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 196-363
Cow position: chr16:237327-237151 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 198-364
Cow position: chr16:16625203-16625028 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 36

Conread position: 198-367
Cow position: chr16:21096184-21096358 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 143

Conread position: 200-363
Cow position: chr16:5833649-5833472 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 94

Conread position: 202-356
Cow position: chr16:44049081-44049243 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 203-355
Cow position: chr16:28112686-28112840 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 48

Conread position: 209-336
Cow position: chr16:43802150-43802021 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 57

Conread position: 236-363
Cow position: chr16:45703993-45704123 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 69

Conread position: 237-357
Cow position: chr16:39645787-39645664 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 101, 0

Show alignments to all cow chromosomes.