Cow genome map

Conread name: MPL-MPL384_11_C22

Conread position: 1-273
Cow position: chr25:18207959-18208234 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 64

Conread position: 1-306
Cow position: chr25:33978884-33979203 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 65

Conread position: 1-321
Cow position: chr25:24669840-24670173 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 68

Conread position: 1-336
Cow position: chr25:9413870-9413523 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-336
Cow position: chr25:13960587-13960238 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr25:17553742-17554085 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr25:18323831-18324181 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr25:19924047-19923697 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr25:26282552-26282200 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr25:27076585-27076237 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr25:28264871-28264523 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 155, 56

Conread position: 1-336
Cow position: chr25:35567362-35567710 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr25:39386307-39386653 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr25:41356275-41356621 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-338
Cow position: chr25:24204608-24204960 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 37, 64

Conread position: 1-338
Cow position: chr25:25510417-25510064 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-355
Cow position: chr25:34013231-34013600 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr25:11961062-11960695 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 68

Conread position: 1-357
Cow position: chr25:17658137-17657771 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 33

Conread position: 1-357
Cow position: chr25:18269978-18269629 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 1-357
Cow position: chr25:20614065-20613687 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 64

Conread position: 1-357
Cow position: chr25:25826978-25826602 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr25:30525848-30526221 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 63

Conread position: 1-362
Cow position: chr25:9595841-9595462 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-362
Cow position: chr25:35625711-35626071 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr25:11666190-11665809 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr25:12081830-12082205 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 61

Conread position: 1-363
Cow position: chr25:12755910-12756274 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr25:17992619-17993001 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr25:18072736-18072371 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr25:18486999-18486605 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 55

Conread position: 1-363
Cow position: chr25:20496056-20495694 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 194, 56

Conread position: 1-363
Cow position: chr25:24654647-24655030 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr25:25480111-25480460 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr25:35612811-35613190 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 57

Conread position: 1-363
Cow position: chr25:40321768-40322144 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 57

Conread position: 1-363
Cow position: chr25:41097671-41098052 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 1-363
Cow position: chr25:41121532-41121150 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-366
Cow position: chr25:41135230-41135605 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 2-336
Cow position: chr25:8655816-8655467 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-336
Cow position: chr25:9055186-9054838 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 2-336
Cow position: chr25:18265708-18265363 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 53

Conread position: 2-352
Cow position: chr25:29216607-29216972 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 52

Conread position: 2-356
Cow position: chr25:32606997-32607359 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 154, 22

Conread position: 2-362
Cow position: chr25:4522295-4522659 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 3-357
Cow position: chr25:16922273-16922639 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 28

Conread position: 3-360
Cow position: chr25:14393583-14393945 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 39

Conread position: 3-366
Cow position: chr25:16430507-16430875 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 61

Conread position: 3-368
Cow position: chr25:37469315-37468959 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 61

Conread position: 5-352
Cow position: chr25:7800537-7800174 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 13-266
Cow position: chr25:5611317-5611066 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 51

Conread position: 13-336
Cow position: chr25:28863385-28863048 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 22-363
Cow position: chr25:11956335-11955977 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 23-331
Cow position: chr25:33838878-33838557 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 23-334
Cow position: chr25:18474697-18474376 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 30-336
Cow position: chr25:24663793-24664100 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 31

Conread position: 39-367
Cow position: chr25:18424778-18424441 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 24

Conread position: 41-332
Cow position: chr25:37447088-37446787 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 115, 22

Conread position: 44-334
Cow position: chr25:18129677-18129378 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 18

Conread position: 80-357
Cow position: chr25:20075922-20075628 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 76, 11

Conread position: 81-363
Cow position: chr25:37648863-37648564 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 14

Conread position: 82-363
Cow position: chr25:34768126-34767832 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 113, 9

Conread position: 91-357
Cow position: chr25:2516440-2516150 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 65, 14

Conread position: 95-357
Cow position: chr25:40389298-40389582 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 10

Conread position: 103-336
Cow position: chr25:28275243-28275492 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 40

Conread position: 105-363
Cow position: chr25:23672442-23672717 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 38

Conread position: 105-363
Cow position: chr25:33687783-33688061 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 38

Conread position: 108-362
Cow position: chr25:16401468-16401744 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 35

Conread position: 108-363
Cow position: chr25:9395835-9395555 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 36

Conread position: 143-334
Cow position: chr25:9957407-9957597 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 53

Conread position: 143-336
Cow position: chr25:2618957-2619153 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 101

Conread position: 143-336
Cow position: chr25:22151494-22151281 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 143-357
Cow position: chr25:40163805-40164031 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 144-338
Cow position: chr25:41345977-41346176 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 72

Conread position: 156-362
Cow position: chr25:2595141-2594909 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 99

Conread position: 176-363
Cow position: chr25:14790573-14790378 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 18

Conread position: 194-336
Cow position: chr25:23366991-23366843 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 194-357
Cow position: chr25:18202246-18202080 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 48

Conread position: 195-335
Cow position: chr25:12938884-12939030 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 195-335
Cow position: chr25:23913990-23913845 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 92

Conread position: 195-336
Cow position: chr25:24776675-24776532 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 195-357
Cow position: chr25:10137136-10136965 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 195-363
Cow position: chr25:20006480-20006296 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 196-357
Cow position: chr25:22576505-22576666 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 73

Conread position: 207-357
Cow position: chr25:393570-393418 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 121

Conread position: 235-363
Cow position: chr25:20790660-20790791 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Show alignments to all cow chromosomes.