Cow genome map

Conread name: MPL-MPL384_11_C22

Conread position: 1-282
Cow position: chr3:15052426-15052721 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 64

Conread position: 1-283
Cow position: chr3:1515994-1516290 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 37, 63

Conread position: 1-297
Cow position: chr3:18762137-18761827 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-333
Cow position: chr3:39065577-39065231 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 62

Conread position: 1-334
Cow position: chr3:9639360-9639694 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-334
Cow position: chr3:20476168-20475827 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-334
Cow position: chr3:37009076-37009423 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-334
Cow position: chr3:43662902-43662566 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 1-334
Cow position: chr3:48603925-48603581 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 1-334
Cow position: chr3:56302139-56302486 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 1-335
Cow position: chr3:12668362-12668018 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-335
Cow position: chr3:13084872-13085222 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-335
Cow position: chr3:14285398-14285052 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 1-335
Cow position: chr3:19753066-19753416 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-335
Cow position: chr3:23204003-23204359 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 1-335
Cow position: chr3:28675490-28675133 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 1-335
Cow position: chr3:28764753-28765093 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 37, 63

Conread position: 1-335
Cow position: chr3:44536307-44536653 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 67

Conread position: 1-335
Cow position: chr3:75157690-75158030 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 1-335
Cow position: chr3:78023778-78024117 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:2024671-2024330 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 155, 53

Conread position: 1-336
Cow position: chr3:2903795-2904140 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 70

Conread position: 1-336
Cow position: chr3:6897496-6897144 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 1-336
Cow position: chr3:7245439-7245788 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:11785020-11784677 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 65

Conread position: 1-336
Cow position: chr3:13275608-13275960 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:15662797-15663131 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:16333086-16332737 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:18815163-18814823 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:18863107-18862758 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:21178587-21178940 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:23011021-23010673 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:23286682-23287019 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:26722150-26722494 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:26742207-26742555 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:28435038-28435381 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:29391447-29391804 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 1-336
Cow position: chr3:30567785-30567431 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 65

Conread position: 1-336
Cow position: chr3:31422456-31422804 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-336
Cow position: chr3:34503469-34503818 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:35884452-35884803 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:37600401-37600048 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-336
Cow position: chr3:38346706-38346355 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:38870235-38869884 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:39857351-39857016 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:42847013-42846662 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:45215133-45215471 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 1-336
Cow position: chr3:49388322-49387966 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 57

Conread position: 1-336
Cow position: chr3:49416182-49416529 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:49604777-49605124 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-336
Cow position: chr3:51256608-51256255 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:59118109-59118461 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 16

Conread position: 1-336
Cow position: chr3:59603470-59603119 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 16

Conread position: 1-336
Cow position: chr3:61278416-61278065 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:64294179-64293838 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 1-336
Cow position: chr3:66623855-66623504 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:67745109-67745454 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 63

Conread position: 1-336
Cow position: chr3:68501127-68500777 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:69930167-69930519 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:75038172-75038524 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:75997227-75997571 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-336
Cow position: chr3:76136995-76136639 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 1-336
Cow position: chr3:76923640-76923977 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 62

Conread position: 1-354
Cow position: chr3:5988893-5989267 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-354
Cow position: chr3:21100472-21100100 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 53

Conread position: 1-354
Cow position: chr3:24442437-24442806 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr3:33124589-33124958 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr3:36874392-36874764 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-354
Cow position: chr3:38096570-38096197 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-354
Cow position: chr3:73450643-73451017 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-355
Cow position: chr3:27546766-27547142 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 1-357
Cow position: chr3:15655650-15656022 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 35

Conread position: 1-357
Cow position: chr3:16115067-16114698 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 64

Conread position: 1-357
Cow position: chr3:16657186-16657581 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 107

Conread position: 1-357
Cow position: chr3:21025757-21026115 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 48

Conread position: 1-357
Cow position: chr3:23944625-23944258 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 63

Conread position: 1-357
Cow position: chr3:24276222-24275865 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 158, 36

Conread position: 1-357
Cow position: chr3:26920397-26920015 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 64

Conread position: 1-357
Cow position: chr3:30939166-30938798 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 54

Conread position: 1-357
Cow position: chr3:33468996-33469372 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 64

Conread position: 1-357
Cow position: chr3:34556720-34557084 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr3:37628552-37628179 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-357
Cow position: chr3:43189597-43189976 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 53

Conread position: 1-357
Cow position: chr3:52256850-52257232 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-357
Cow position: chr3:52651286-52651661 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 62

Conread position: 1-357
Cow position: chr3:64171897-64171533 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 37, 63

Conread position: 1-361
Cow position: chr3:2506978-2507352 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 60

Conread position: 1-361
Cow position: chr3:14724799-14724407 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 64

Conread position: 1-361
Cow position: chr3:23216664-23217045 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-361
Cow position: chr3:48600205-48599827 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 99

Conread position: 1-362
Cow position: chr3:3884525-3884897 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-362
Cow position: chr3:16005128-16005508 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 65

Conread position: 1-362
Cow position: chr3:18184576-18184200 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-362
Cow position: chr3:21302929-21303296 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:5445158-5445540 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr3:9665284-9665665 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 1-363
Cow position: chr3:11019115-11018735 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-363
Cow position: chr3:14280345-14279967 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:16157186-16156811 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-363
Cow position: chr3:17865098-17864715 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr3:18245914-18246295 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-363
Cow position: chr3:22220805-22220428 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-363
Cow position: chr3:22234822-22235214 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr3:23169569-23169937 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 1-363
Cow position: chr3:25690296-25689933 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:34392615-34392999 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:37982696-37983078 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:43528736-43529114 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 53

Conread position: 1-363
Cow position: chr3:45184332-45184699 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:45881402-45881025 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 65

Conread position: 1-363
Cow position: chr3:51234835-51235214 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-363
Cow position: chr3:53047130-53047504 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 1-363
Cow position: chr3:54608343-54608722 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:56160157-56160538 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:58766798-58766431 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-363
Cow position: chr3:62793419-62793794 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:63177009-63176635 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 1-363
Cow position: chr3:66978334-66977948 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 1-363
Cow position: chr3:81374582-81374966 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 1-364
Cow position: chr3:21082528-21082152 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 52

Conread position: 1-364
Cow position: chr3:75479521-75479148 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 1-366
Cow position: chr3:12750555-12750183 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 31

Conread position: 1-366
Cow position: chr3:55461000-55461378 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 36, 49

Conread position: 1-367
Cow position: chr3:58033999-58034377 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 2-248
Cow position: chr3:79094565-79094810 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 62

Conread position: 2-305
Cow position: chr3:66610340-66610640 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-334
Cow position: chr3:3031900-3031551 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 63

Conread position: 2-336
Cow position: chr3:25057332-25056999 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-336
Cow position: chr3:29282422-29282077 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 2-336
Cow position: chr3:53519448-53519121 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 2-336
Cow position: chr3:56697506-56697155 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-336
Cow position: chr3:63202891-63202555 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 51

Conread position: 2-336
Cow position: chr3:72633741-72633390 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-336
Cow position: chr3:73936533-73936868 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 62

Conread position: 2-336
Cow position: chr3:77187950-77187603 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 2-336
Cow position: chr3:84199438-84199086 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 2-356
Cow position: chr3:55374733-55374370 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 22

Conread position: 2-356
Cow position: chr3:65581540-65581900 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 58

Conread position: 2-357
Cow position: chr3:17937349-17937724 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 2-357
Cow position: chr3:23497082-23497464 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 62

Conread position: 2-357
Cow position: chr3:27867323-27866956 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 86

Conread position: 2-357
Cow position: chr3:38863344-38863013 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 62

Conread position: 2-357
Cow position: chr3:49132754-49133107 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 196, 51

Conread position: 2-357
Cow position: chr3:49336855-49336486 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 63

Conread position: 2-357
Cow position: chr3:76188191-76187832 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 52

Conread position: 2-360
Cow position: chr3:76932236-76932604 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 61

Conread position: 2-361
Cow position: chr3:60932932-60932555 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 61

Conread position: 2-363
Cow position: chr3:226223-226603 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 63

Conread position: 2-363
Cow position: chr3:6689496-6689116 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 62

Conread position: 2-363
Cow position: chr3:39970399-39970781 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 61

Conread position: 2-364
Cow position: chr3:14633580-14633954 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 66

Conread position: 2-364
Cow position: chr3:26567443-26567063 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 61

Conread position: 3-263
Cow position: chr3:46062999-46062730 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 3-336
Cow position: chr3:72174631-72174988 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 61

Conread position: 3-336
Cow position: chr3:77550624-77550286 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 3-361
Cow position: chr3:24454886-24455243 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 61

Conread position: 3-361
Cow position: chr3:70891109-70890734 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 61

Conread position: 3-363
Cow position: chr3:77366046-77366419 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 61

Conread position: 4-335
Cow position: chr3:31933679-31934019 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 34, 60

Conread position: 4-357
Cow position: chr3:77467362-77467002 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 66

Conread position: 5-354
Cow position: chr3:65989572-65989208 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 7-363
Cow position: chr3:15379548-15379921 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 58

Conread position: 8-356
Cow position: chr3:38497427-38497088 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 56

Conread position: 12-196
Cow position: chr3:66649965-66650149 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 78

Conread position: 12-357
Cow position: chr3:59333217-59332877 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 51

Conread position: 12-361
Cow position: chr3:15571094-15570723 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 26, 57

Conread position: 12-363
Cow position: chr3:61539258-61538887 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 13-334
Cow position: chr3:61243036-61242702 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 13-336
Cow position: chr3:57481100-57481428 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 48

Conread position: 13-336
Cow position: chr3:59865137-59864797 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 13-362
Cow position: chr3:24585570-24585942 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 13-363
Cow position: chr3:13517666-13518027 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 51

Conread position: 13-363
Cow position: chr3:14613675-14613315 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 25, 53

Conread position: 13-363
Cow position: chr3:22919177-22918810 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 50

Conread position: 13-363
Cow position: chr3:50921684-50921325 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 14-336
Cow position: chr3:6785970-6785634 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 14-361
Cow position: chr3:61678190-61677824 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 50

Conread position: 16-335
Cow position: chr3:1483675-1483346 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 43

Conread position: 16-336
Cow position: chr3:11279057-11278725 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 46

Conread position: 16-354
Cow position: chr3:5887531-5887182 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 16-361
Cow position: chr3:58951113-58950750 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 76

Conread position: 17-335
Cow position: chr3:50461957-50461628 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 18-357
Cow position: chr3:19717620-19717975 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 47, 15

Conread position: 20-357
Cow position: chr3:44254950-44255305 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 43

Conread position: 21-314
Cow position: chr3:35578439-35578137 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 49

Conread position: 22-292
Cow position: chr3:45312442-45312168 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 42

Conread position: 24-357
Cow position: chr3:38255276-38254933 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 41

Conread position: 24-363
Cow position: chr3:12672752-12673089 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 40

Conread position: 27-357
Cow position: chr3:72776728-72776392 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 38

Conread position: 38-336
Cow position: chr3:24639032-24638723 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 38-363
Cow position: chr3:20780829-20781172 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 25

Conread position: 39-363
Cow position: chr3:37040922-37040578 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 24

Conread position: 39-364
Cow position: chr3:54788716-54788371 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 117, 24

Conread position: 40-354
Cow position: chr3:57590954-57590628 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 23

Conread position: 40-363
Cow position: chr3:63688294-63688624 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 24

Conread position: 43-363
Cow position: chr3:80564425-80564088 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 20

Conread position: 44-329
Cow position: chr3:74233694-74233399 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 112, 19

Conread position: 44-363
Cow position: chr3:26993747-26993412 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 18

Conread position: 51-336
Cow position: chr3:63275910-63276208 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 8, 28

Conread position: 55-336
Cow position: chr3:64654280-64653986 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 8

Conread position: 60-361
Cow position: chr3:40101243-40101569 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 48

Conread position: 60-362
Cow position: chr3:48528635-48528323 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 31

Conread position: 71-363
Cow position: chr3:4039336-4039646 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 20

Conread position: 72-363
Cow position: chr3:35056560-35056264 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 84, 19

Conread position: 77-357
Cow position: chr3:22353207-22352907 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 49, 12

Conread position: 77-363
Cow position: chr3:174091-173792 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 14

Conread position: 81-363
Cow position: chr3:46349801-46349512 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 10

Conread position: 85-336
Cow position: chr3:67021424-67021684 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 18

Conread position: 88-357
Cow position: chr3:54863039-54863327 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 17

Conread position: 91-357
Cow position: chr3:34086637-34086905 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 14

Conread position: 91-357
Cow position: chr3:82275089-82275375 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 14

Conread position: 103-363
Cow position: chr3:33254294-33254574 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 40

Conread position: 104-304
Cow position: chr3:32772599-32772391 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 42

Conread position: 105-363
Cow position: chr3:16293348-16293629 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 31

Conread position: 106-336
Cow position: chr3:2365350-2365589 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 37

Conread position: 106-336
Cow position: chr3:49120985-49121232 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 52, 37

Conread position: 106-363
Cow position: chr3:67284179-67283902 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 88, 37

Conread position: 116-336
Cow position: chr3:12676082-12676321 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 27

Conread position: 119-336
Cow position: chr3:5951072-5951306 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 24

Conread position: 119-361
Cow position: chr3:40003956-40004222 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 24

Conread position: 129-336
Cow position: chr3:54959276-54959050 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 14

Conread position: 133-336
Cow position: chr3:6865189-6864976 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 10

Conread position: 133-363
Cow position: chr3:36671078-36671330 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 10

Conread position: 141-362
Cow position: chr3:21005390-21005150 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 205

Conread position: 143-361
Cow position: chr3:70336168-70336386 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 74

Conread position: 143-363
Cow position: chr3:18253050-18252830 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 42

Conread position: 156-363
Cow position: chr3:72669044-72669272 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 91

Conread position: 159-306
Cow position: chr3:78261635-78261801 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 159-336
Cow position: chr3:7476408-7476603 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 159-336
Cow position: chr3:81101592-81101396 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 159-352
Cow position: chr3:31050511-31050722 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 159-361
Cow position: chr3:53387623-53387824 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 36

Conread position: 159-362
Cow position: chr3:53404008-53404210 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 36

Conread position: 159-363
Cow position: chr3:3652793-3653014 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 169-336
Cow position: chr3:2851756-2851928 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 26

Conread position: 169-357
Cow position: chr3:56103240-56103033 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 69

Conread position: 175-363
Cow position: chr3:11384794-11384598 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 13

Conread position: 176-363
Cow position: chr3:19794613-19794804 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 183-336
Cow position: chr3:80582329-80582174 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 190-357
Cow position: chr3:46900191-46900025 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 21

Conread position: 191-336
Cow position: chr3:56705515-56705663 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 38

Conread position: 194-363
Cow position: chr3:523670-523497 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 195-332
Cow position: chr3:46014225-46014362 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 42

Conread position: 195-334
Cow position: chr3:78664870-78665010 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 76

Conread position: 195-335
Cow position: chr3:19824602-19824749 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 195-335
Cow position: chr3:36570971-36571117 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 195-336
Cow position: chr3:11334399-11334547 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 195-336
Cow position: chr3:17460678-17460534 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 33

Conread position: 195-336
Cow position: chr3:18886922-18886775 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 195-336
Cow position: chr3:33326847-33326707 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 48

Conread position: 195-336
Cow position: chr3:40826861-40826714 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 195-357
Cow position: chr3:15988402-15988233 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 39

Conread position: 195-357
Cow position: chr3:72603678-72603509 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 195-362
Cow position: chr3:47340672-47340848 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 195-362
Cow position: chr3:60891728-60891553 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 195-364
Cow position: chr3:6874611-6874788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 136

Conread position: 196-336
Cow position: chr3:20999608-20999754 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 196-352
Cow position: chr3:64281861-64282022 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 196-358
Cow position: chr3:80929813-80929979 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 196-363
Cow position: chr3:73765183-73765361 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 157

Conread position: 202-336
Cow position: chr3:50347255-50347125 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 202-357
Cow position: chr3:39327995-39327839 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 44

Conread position: 202-366
Cow position: chr3:68043048-68043221 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 226-360
Cow position: chr3:25753679-25753543 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 18

Conread position: 228-334
Cow position: chr3:70322244-70322355 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 230-363
Cow position: chr3:71246017-71245883 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 18

Conread position: 235-336
Cow position: chr3:54653756-54653857 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.