Cow genome map

Conread name: Mixc-0025k15

Conread position: 407-587
Cow position: chr1:73901174-73901000 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 7

Conread position: 427-579
Cow position: chr1:26424612-26424759 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 25

Conread position: 427-580
Cow position: chr1:76096597-76096437 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 447-588
Cow position: chr1:5278282-5278420 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 100

Conread position: 453-584
Cow position: chr1:2998073-2997943 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 453-589
Cow position: chr1:23041694-23041556 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 8

Conread position: 454-581
Cow position: chr1:18283605-18283479 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 454-581
Cow position: chr1:31189990-31190109 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 454-581
Cow position: chr1:54217140-54217014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 454-584
Cow position: chr1:54289068-54289198 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 7

Conread position: 454-584
Cow position: chr1:95764970-95765096 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 454-587
Cow position: chr1:97622097-97622225 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 454-590
Cow position: chr1:59132093-59132228 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 454-608
Cow position: chr1:70533815-70533965 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 454-611
Cow position: chr1:50345669-50345515 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 454-672
Cow position: chr1:80764412-80764628 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 135, 5

Conread position: 454-688
Cow position: chr1:18414344-18414586 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 150, 7

Conread position: 455-586
Cow position: chr1:76170325-76170198 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 455-616
Cow position: chr1:53920710-53920553 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 458-581
Cow position: chr1:15691452-15691333 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 459-587
Cow position: chr1:29975485-29975608 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 460-599
Cow position: chr1:62713837-62713968 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 461-556
Cow position: chr1:29338032-29337937 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 461-570
Cow position: chr1:82076695-82076586 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 461-578
Cow position: chr1:50261810-50261927 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 461-579
Cow position: chr1:101772017-101771900 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 461-581
Cow position: chr1:29916529-29916409 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 30

Conread position: 461-581
Cow position: chr1:45925157-45925038 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 48

Conread position: 461-582
Cow position: chr1:30413708-30413591 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 461-583
Cow position: chr1:26531464-26531588 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 461-583
Cow position: chr1:35843809-35843931 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 461-583
Cow position: chr1:48083845-48083724 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 461-584
Cow position: chr1:6130618-6130738 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 461-584
Cow position: chr1:28678640-28678517 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 461-584
Cow position: chr1:41735502-41735626 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 461-584
Cow position: chr1:64189618-64189495 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 461-584
Cow position: chr1:80973491-80973609 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 461-584
Cow position: chr1:85411695-85411575 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 86

Conread position: 461-585
Cow position: chr1:44746977-44746857 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 461-587
Cow position: chr1:46006087-46006214 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 461-587
Cow position: chr1:69415593-69415718 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 461-587
Cow position: chr1:73653525-73653647 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 461-587
Cow position: chr1:75347742-75347616 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 461-590
Cow position: chr1:3657248-3657374 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 85

Conread position: 461-590
Cow position: chr1:10719362-10719490 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 461-590
Cow position: chr1:15314799-15314933 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 119

Conread position: 461-590
Cow position: chr1:22777426-22777556 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 461-590
Cow position: chr1:26688355-26688484 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 56

Conread position: 461-590
Cow position: chr1:38205592-38205462 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 461-590
Cow position: chr1:62732687-62732561 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 461-590
Cow position: chr1:71136270-71136140 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 461-598
Cow position: chr1:50045917-50045781 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 8

Conread position: 461-605
Cow position: chr1:45310158-45310300 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 82

Conread position: 461-611
Cow position: chr1:8192618-8192760 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 461-611
Cow position: chr1:74947001-74947148 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 461-683
Cow position: chr1:96472548-96472317 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 167

Conread position: 461-688
Cow position: chr1:75998350-75998591 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 172

Conread position: 461-698
Cow position: chr1:20377227-20377467 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 30

Conread position: 461-699
Cow position: chr1:97603521-97603749 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 189, 79

Conread position: 461-700
Cow position: chr1:13195316-13195566 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 30

Conread position: 461-700
Cow position: chr1:22910471-22910227 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 75

Conread position: 461-700
Cow position: chr1:25184228-25183986 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 149, 74

Conread position: 461-700
Cow position: chr1:97619740-97619982 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 153

Conread position: 461-701
Cow position: chr1:20582061-20581802 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 462-587
Cow position: chr1:90422966-90423089 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 463-579
Cow position: chr1:80384648-80384764 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 463-687
Cow position: chr1:2765529-2765306 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 171

Conread position: 463-700
Cow position: chr1:61661211-61661453 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 88

Conread position: 464-611
Cow position: chr1:6794811-6794954 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 469-581
Cow position: chr1:4451165-4451273 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 469-585
Cow position: chr1:69941613-69941730 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 472-587
Cow position: chr1:57783111-57782999 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 75

Conread position: 478-700
Cow position: chr1:92642347-92642588 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 484-700
Cow position: chr1:86019991-86020207 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 143

Conread position: 508-694
Cow position: chr1:17188597-17188766 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 569-700
Cow position: chr1:69415729-69415859 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 48

Show alignments to all cow chromosomes.