Cow genome map
| Conread name: | Mixc-0025k15 |
| Conread position: | 415-691 |
| Cow position: | chr10:68566313-68566047 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 447-544 |
| Cow position: | chr10:2266944-2267041 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 452-582 |
| Cow position: | chr10:3115581-3115448 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 454-566 |
| Cow position: | chr10:61426641-61426752 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-578 |
| Cow position: | chr10:52244553-52244676 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-580 |
| Cow position: | chr10:65130391-65130514 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 454-584 |
| Cow position: | chr10:1478338-1478468 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 7 |
| Conread position: | 454-584 |
| Cow position: | chr10:11404044-11404171 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-587 |
| Cow position: | chr10:19704418-19704551 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-590 |
| Cow position: | chr10:30741473-30741340 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 454-596 |
| Cow position: | chr10:23948824-23948967 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 454-617 |
| Cow position: | chr10:69226019-69225859 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-699 |
| Cow position: | chr10:38449219-38449470 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 454-710 |
| Cow position: | chr10:11497315-11497061 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 7 |
| Conread position: | 455-584 |
| Cow position: | chr10:6921812-6921689 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 455-590 |
| Cow position: | chr10:59153566-59153692 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 455-700 |
| Cow position: | chr10:25971186-25970946 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 459-586 |
| Cow position: | chr10:50044553-50044683 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 459-587 |
| Cow position: | chr10:16683716-16683845 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 461-548 |
| Cow position: | chr10:52889147-52889234 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-574 |
| Cow position: | chr10:1070057-1070170 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-580 |
| Cow position: | chr10:21424591-21424706 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-582 |
| Cow position: | chr10:48255136-48255258 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 461-583 |
| Cow position: | chr10:10124431-10124310 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 461-583 |
| Cow position: | chr10:62516970-62516848 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:6490675-6490799 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:9794573-9794695 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:31368644-31368767 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:38429461-38429580 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:41984799-41984922 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:49624855-49624732 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-584 |
| Cow position: | chr10:65072028-65072151 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-587 |
| Cow position: | chr10:24786196-24786070 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 461-587 |
| Cow position: | chr10:53762033-53762152 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 461-590 |
| Cow position: | chr10:23404288-23404161 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 461-590 |
| Cow position: | chr10:52589593-52589730 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 461-592 |
| Cow position: | chr10:58608190-58608060 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 461-613 |
| Cow position: | chr10:68251900-68251753 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 461-672 |
| Cow position: | chr10:22479638-22479846 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 131, 85 |
| Conread position: | 461-672 |
| Cow position: | chr10:66753327-66753115 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 167, 127 |
| Conread position: | 461-683 |
| Cow position: | chr10:30753262-30753043 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 156 |
| Conread position: | 461-691 |
| Cow position: | chr10:8760075-8760304 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 112, 30 |
| Conread position: | 461-700 |
| Cow position: | chr10:2407043-2407291 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 461-700 |
| Cow position: | chr10:6011964-6012209 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 62, 166 |
| Conread position: | 461-700 |
| Cow position: | chr10:8077073-8077323 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 168 |
| Conread position: | 461-700 |
| Cow position: | chr10:15391578-15391346 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 191, 32 |
| Conread position: | 461-700 |
| Cow position: | chr10:16649841-16650100 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 461-700 |
| Cow position: | chr10:29689244-29689494 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 208 |
| Conread position: | 461-700 |
| Cow position: | chr10:30449975-30450237 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 461-705 |
| Cow position: | chr10:15873987-15874230 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 123, 104 |
| Conread position: | 461-709 |
| Cow position: | chr10:20109863-20110093 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 204, 18 |
| Conread position: | 464-584 |
| Cow position: | chr10:8412966-8413086 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-687 |
| Cow position: | chr10:31855417-31855196 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 469-590 |
| Cow position: | chr10:25293867-25293746 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 472-692 |
| Cow position: | chr10:27538579-27538346 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 213 |
| Conread position: | 473-590 |
| Cow position: | chr10:42139680-42139793 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 473-700 |
| Cow position: | chr10:23135387-23135155 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 113, 73 |
| Conread position: | 480-698 |
| Cow position: | chr10:7328778-7328557 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 109, 5 |
| Conread position: | 494-614 |
| Cow position: | chr10:34923108-34922982 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 494-700 |
| Cow position: | chr10:44855120-44854918 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 520-700 |
| Cow position: | chr10:2394468-2394639 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 575-700 |
| Cow position: | chr10:11032547-11032673 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 42 |
Show alignments to all cow chromosomes.