Cow genome map
| Conread name: | Mixc-0025k15 |
| Conread position: | 426-583 |
| Cow position: | chr13:7010308-7010463 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 436-587 |
| Cow position: | chr13:54080966-54080815 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-575 |
| Cow position: | chr13:46353646-46353530 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-579 |
| Cow position: | chr13:1958875-1958999 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-582 |
| Cow position: | chr13:12745539-12745666 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 454-585 |
| Cow position: | chr13:21628013-21627886 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 454-587 |
| Cow position: | chr13:23265600-23265732 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-587 |
| Cow position: | chr13:33281873-33282004 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-591 |
| Cow position: | chr13:20466418-20466281 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 454-594 |
| Cow position: | chr13:8822733-8822869 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 454-671 |
| Cow position: | chr13:32535523-32535745 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 455-566 |
| Cow position: | chr13:58615055-58615167 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 455-583 |
| Cow position: | chr13:35719270-35719146 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 456-590 |
| Cow position: | chr13:32657246-32657381 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 456-700 |
| Cow position: | chr13:2302944-2302703 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 461-544 |
| Cow position: | chr13:25206987-25207070 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 75 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-575 |
| Cow position: | chr13:22082263-22082373 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-579 |
| Cow position: | chr13:58621071-58620956 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 461-580 |
| Cow position: | chr13:14717466-14717347 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-580 |
| Cow position: | chr13:20180289-20180406 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 461-581 |
| Cow position: | chr13:33955152-33955036 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 461-583 |
| Cow position: | chr13:12233580-12233454 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 461-583 |
| Cow position: | chr13:20156360-20156477 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-583 |
| Cow position: | chr13:22887116-22886998 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 461-583 |
| Cow position: | chr13:58347958-58348074 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 461-584 |
| Cow position: | chr13:32167437-32167319 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 461-584 |
| Cow position: | chr13:34995456-34995330 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 461-586 |
| Cow position: | chr13:17796241-17796366 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 461-587 |
| Cow position: | chr13:3016300-3016176 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 461-587 |
| Cow position: | chr13:11768171-11768044 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 461-587 |
| Cow position: | chr13:12521905-12521779 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-587 |
| Cow position: | chr13:13578161-13578033 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 461-587 |
| Cow position: | chr13:14099238-14099116 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-587 |
| Cow position: | chr13:18550878-18551000 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 461-587 |
| Cow position: | chr13:50739042-50739165 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 118, 85 |
| Conread position: | 461-587 |
| Cow position: | chr13:54815038-54814914 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 461-590 |
| Cow position: | chr13:22075544-22075672 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 461-590 |
| Cow position: | chr13:52569130-52569000 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 461-592 |
| Cow position: | chr13:9083136-9083003 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 461-592 |
| Cow position: | chr13:15091036-15090905 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 461-611 |
| Cow position: | chr13:9802941-9803088 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 124, 83 |
| Conread position: | 461-618 |
| Cow position: | chr13:30271196-30271347 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-683 |
| Cow position: | chr13:32904652-32904870 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 190 |
| Conread position: | 461-687 |
| Cow position: | chr13:16952344-16952572 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 125, 78 |
| Conread position: | 461-687 |
| Cow position: | chr13:54865134-54864908 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 461-700 |
| Cow position: | chr13:6621718-6621463 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 461-700 |
| Cow position: | chr13:26508357-26508601 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 95 |
| Conread position: | 461-703 |
| Cow position: | chr13:29820333-29820103 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 149, 128 |
| Conread position: | 462-587 |
| Cow position: | chr13:46430430-46430309 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 462-587 |
| Cow position: | chr13:49847797-49847922 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-587 |
| Cow position: | chr13:18350711-18350831 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 463-665 |
| Cow position: | chr13:31852641-31852844 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 21 |
| Conread position: | 470-578 |
| Cow position: | chr13:10932433-10932541 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 473-700 |
| Cow position: | chr13:58484660-58484892 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 540-700 |
| Cow position: | chr13:21402817-21402662 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.