Cow genome map
| Conread name: | Mixc-0025k15 |
| Conread position: | 413-592 |
| Cow position: | chr18:55696894-55697072 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 417-671 |
| Cow position: | chr18:23714766-23715021 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 6 |
| Conread position: | 427-587 |
| Cow position: | chr18:32517238-32517396 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 437-551 |
| Cow position: | chr18:29949851-29949738 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 450-581 |
| Cow position: | chr18:4803280-4803406 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 454-580 |
| Cow position: | chr18:16726733-16726610 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-590 |
| Cow position: | chr18:45961186-45961322 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 454-701 |
| Cow position: | chr18:25002805-25003062 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 127, 7 |
| Conread position: | 455-586 |
| Cow position: | chr18:10101572-10101445 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 459-592 |
| Cow position: | chr18:6075315-6075449 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 460-590 |
| Cow position: | chr18:51587464-51587593 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 461-580 |
| Cow position: | chr18:21706105-21706220 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 461-583 |
| Cow position: | chr18:15831518-15831636 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-584 |
| Cow position: | chr18:16298184-16298061 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-587 |
| Cow position: | chr18:44400525-44400403 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-587 |
| Cow position: | chr18:50700763-50700640 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 461-588 |
| Cow position: | chr18:16841973-16842108 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 461-590 |
| Cow position: | chr18:33843006-33843137 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 461-591 |
| Cow position: | chr18:42061154-42061024 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 461-604 |
| Cow position: | chr18:26372999-26372856 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 128, 134 |
| Conread position: | 461-665 |
| Cow position: | chr18:22411532-22411737 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 192 |
| Conread position: | 461-687 |
| Cow position: | chr18:33275368-33275139 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 122, 55 |
| Conread position: | 461-700 |
| Cow position: | chr18:716448-716207 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 461-700 |
| Cow position: | chr18:44493407-44493659 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 124, 92 |
| Conread position: | 461-700 |
| Cow position: | chr18:51412423-51412189 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 69 |
| Conread position: | 463-582 |
| Cow position: | chr18:48458751-48458632 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-587 |
| Cow position: | chr18:30566483-30566602 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 463-587 |
| Cow position: | chr18:32773955-32773831 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 465-590 |
| Cow position: | chr18:213462-213587 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 466-581 |
| Cow position: | chr18:21681899-21682014 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 468-577 |
| Cow position: | chr18:48717865-48717975 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 469-584 |
| Cow position: | chr18:32909118-32909005 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 469-590 |
| Cow position: | chr18:10687523-10687648 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 469-700 |
| Cow position: | chr18:4578416-4578649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 471-585 |
| Cow position: | chr18:43712118-43712002 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 477-590 |
| Cow position: | chr18:21176250-21176138 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 486-681 |
| Cow position: | chr18:51537626-51537826 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 139 |
| Conread position: | 564-700 |
| Cow position: | chr18:35797574-35797440 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 52 |
Show alignments to all cow chromosomes.