Cow genome map
| Conread name: | Mixc-0025k15 |
| Conread position: | 424-681 |
| Cow position: | chr5:13044236-13044501 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 448-587 |
| Cow position: | chr5:27008044-27007911 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 453-591 |
| Cow position: | chr5:54090181-54090043 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-572 |
| Cow position: | chr5:7433015-7433133 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 454-587 |
| Cow position: | chr5:17028239-17028106 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 454-588 |
| Cow position: | chr5:6987596-6987460 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 454-590 |
| Cow position: | chr5:34184368-34184232 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-665 |
| Cow position: | chr5:39442441-39442231 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 193, 21 |
| Conread position: | 455-584 |
| Cow position: | chr5:49655884-49656006 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 457-587 |
| Cow position: | chr5:1349651-1349781 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 457-587 |
| Cow position: | chr5:49567567-49567441 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 459-700 |
| Cow position: | chr5:23640877-23641119 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 118, 74 |
| Conread position: | 461-570 |
| Cow position: | chr5:21356751-21356857 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 461-572 |
| Cow position: | chr5:21530967-21531079 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 461-575 |
| Cow position: | chr5:17267754-17267868 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-580 |
| Cow position: | chr5:58343996-58343877 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-581 |
| Cow position: | chr5:21194985-21195100 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-581 |
| Cow position: | chr5:36028008-36028126 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 461-583 |
| Cow position: | chr5:30333088-30332970 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-583 |
| Cow position: | chr5:58748907-58748786 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-584 |
| Cow position: | chr5:25899736-25899857 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 461-584 |
| Cow position: | chr5:34279469-34279588 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 461-584 |
| Cow position: | chr5:63188189-63188308 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-584 |
| Cow position: | chr5:73556058-73556177 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-585 |
| Cow position: | chr5:41604761-41604641 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-587 |
| Cow position: | chr5:3649324-3649446 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 461-587 |
| Cow position: | chr5:4927429-4927553 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 461-587 |
| Cow position: | chr5:23366627-23366752 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 461-587 |
| Cow position: | chr5:63328755-63328880 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 461-587 |
| Cow position: | chr5:75687187-75687318 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 461-590 |
| Cow position: | chr5:27411263-27411393 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 461-590 |
| Cow position: | chr5:34914414-34914544 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 461-592 |
| Cow position: | chr5:36487557-36487689 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 461-649 |
| Cow position: | chr5:18695298-18695103 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 165 |
| Conread position: | 461-665 |
| Cow position: | chr5:1343718-1343918 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 159, 14 |
| Conread position: | 461-683 |
| Cow position: | chr5:73526504-73526271 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 461-693 |
| Cow position: | chr5:47680880-47681121 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 127, 171 |
| Conread position: | 461-698 |
| Cow position: | chr5:50425349-50425601 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 84, 168 |
| Conread position: | 461-700 |
| Cow position: | chr5:17869823-17869580 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 461-700 |
| Cow position: | chr5:69773683-69773445 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 469-687 |
| Cow position: | chr5:31561665-31561447 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 471-586 |
| Cow position: | chr5:21534983-21535099 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 479-700 |
| Cow position: | chr5:14538560-14538785 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 562-700 |
| Cow position: | chr5:35209467-35209601 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.