Cow genome map
| Conread name: | Mixc-0025k15 |
| Conread position: | 426-590 |
| Cow position: | chr6:15997031-15997191 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 427-690 |
| Cow position: | chr6:33929356-33929630 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 431-583 |
| Cow position: | chr6:51840460-51840308 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-586 |
| Cow position: | chr6:7836083-7835945 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 443-700 |
| Cow position: | chr6:2583030-2582762 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 190 |
| Conread position: | 444-700 |
| Cow position: | chr6:28278843-28278577 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 8 |
| Conread position: | 454-567 |
| Cow position: | chr6:29649263-29649151 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-582 |
| Cow position: | chr6:827549-827672 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 454-583 |
| Cow position: | chr6:24545771-24545643 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 454-586 |
| Cow position: | chr6:47192367-47192498 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 454-700 |
| Cow position: | chr6:20255249-20255500 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 7 |
| Conread position: | 454-700 |
| Cow position: | chr6:48806851-48807108 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 455-580 |
| Cow position: | chr6:29754670-29754795 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 456-583 |
| Cow position: | chr6:57118786-57118912 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 459-588 |
| Cow position: | chr6:15782361-15782490 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-666 |
| Cow position: | chr6:40498-40702 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 183, 14 |
| Conread position: | 461-564 |
| Cow position: | chr6:15753995-15753892 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-572 |
| Cow position: | chr6:37612257-37612147 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 99, 89 |
| Conread position: | 461-581 |
| Cow position: | chr6:16733566-16733451 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 461-581 |
| Cow position: | chr6:51294437-51294316 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 461-581 |
| Cow position: | chr6:59496370-59496251 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 461-583 |
| Cow position: | chr6:12421138-12421261 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 461-583 |
| Cow position: | chr6:13718915-13718793 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-583 |
| Cow position: | chr6:36194747-36194628 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 461-584 |
| Cow position: | chr6:38914592-38914471 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 461-584 |
| Cow position: | chr6:54478999-54479122 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-585 |
| Cow position: | chr6:35774831-35774956 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 461-587 |
| Cow position: | chr6:6943529-6943654 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 461-587 |
| Cow position: | chr6:19427602-19427482 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 461-587 |
| Cow position: | chr6:24558030-24557910 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 461-587 |
| Cow position: | chr6:30160470-30160351 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 461-587 |
| Cow position: | chr6:50034578-50034701 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 461-587 |
| Cow position: | chr6:56376197-56376323 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-589 |
| Cow position: | chr6:54144454-54144329 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 85 |
| Conread position: | 461-590 |
| Cow position: | chr6:32277097-32276968 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-590 |
| Cow position: | chr6:53939116-53938986 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 461-609 |
| Cow position: | chr6:64427376-64427228 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 123, 133 |
| Conread position: | 461-671 |
| Cow position: | chr6:29412637-29412843 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 152, 78 |
| Conread position: | 461-672 |
| Cow position: | chr6:48572728-48572942 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 168 |
| Conread position: | 461-686 |
| Cow position: | chr6:16219914-16220122 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 189, 62 |
| Conread position: | 461-687 |
| Cow position: | chr6:8986255-8986481 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 118, 74 |
| Conread position: | 461-687 |
| Cow position: | chr6:38894962-38895181 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 189, 8 |
| Conread position: | 461-687 |
| Cow position: | chr6:53674015-53673787 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 191, 168 |
| Conread position: | 461-700 |
| Cow position: | chr6:1907671-1907432 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 80, 161 |
| Conread position: | 461-700 |
| Cow position: | chr6:7824899-7824652 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 461-700 |
| Cow position: | chr6:10237485-10237253 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 82 |
| Conread position: | 461-700 |
| Cow position: | chr6:11790127-11789890 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 461-700 |
| Cow position: | chr6:32817131-32816886 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 461-700 |
| Cow position: | chr6:37054136-37053888 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 128, 74 |
| Conread position: | 461-700 |
| Cow position: | chr6:65872040-65871789 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 461-703 |
| Cow position: | chr6:22969210-22968967 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 462-584 |
| Cow position: | chr6:24622823-24622945 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-587 |
| Cow position: | chr6:9026669-9026549 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 492-583 |
| Cow position: | chr6:35415395-35415486 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 576-700 |
| Cow position: | chr6:8318155-8318276 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 11 |
Show alignments to all cow chromosomes.