Cow genome map
| Conread name: | Mixc-0029,d15 |
| Conread position: | 1-146 |
| Cow position: | chr14:33488152-33488005 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-157 |
| Cow position: | chr14:7472561-7472403 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-189 |
| Cow position: | chr14:30735066-30735253 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 1-196 |
| Cow position: | chr14:20782657-20782461 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 1-197 |
| Cow position: | chr14:46513738-46513542 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 1-198 |
| Cow position: | chr14:34043465-34043659 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 1-200 |
| Cow position: | chr14:13779154-13778955 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 1-200 |
| Cow position: | chr14:30706084-30706285 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 1-200 |
| Cow position: | chr14:48825495-48825294 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-219 |
| Cow position: | chr14:13863886-13864104 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 165 |
| Conread position: | 1-221 |
| Cow position: | chr14:2284533-2284308 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 1-221 |
| Cow position: | chr14:9045762-9045535 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr14:29047708-29047934 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr14:30584758-30584983 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 181 |
| Conread position: | 1-221 |
| Cow position: | chr14:45671852-45672076 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 1-221 |
| Cow position: | chr14:45711787-45712015 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-223 |
| Cow position: | chr14:12742870-12743098 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-223 |
| Cow position: | chr14:13303224-13302995 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 1-223 |
| Cow position: | chr14:17000861-17001088 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 1-223 |
| Cow position: | chr14:17685598-17685370 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-223 |
| Cow position: | chr14:19328068-19328296 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr14:29777302-29777530 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-223 |
| Cow position: | chr14:37224101-37223875 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 1-224 |
| Cow position: | chr14:23257554-23257325 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-225 |
| Cow position: | chr14:48254101-48254331 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 1-240 |
| Cow position: | chr14:45081245-45081002 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 1-247 |
| Cow position: | chr14:44287049-44287303 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-248 |
| Cow position: | chr14:33237237-33236989 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 127, 60 |
| Conread position: | 1-248 |
| Cow position: | chr14:40738710-40738459 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 149 |
| Conread position: | 1-250 |
| Cow position: | chr14:38815604-38815864 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-252 |
| Cow position: | chr14:11153964-11154220 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-252 |
| Cow position: | chr14:17491261-17491518 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-286 |
| Cow position: | chr14:33393583-33393875 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 3-248 |
| Cow position: | chr14:22031222-22031476 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 137 |
| Conread position: | 5-221 |
| Cow position: | chr14:30596187-30596408 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 7-223 |
| Cow position: | chr14:5512018-5511796 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 15-216 |
| Cow position: | chr14:34860871-34860661 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 38-249 |
| Cow position: | chr14:41409048-41408830 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 325-637 |
| Cow position: | chr14:30706701-30706372 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 343-633 |
| Cow position: | chr14:33487564-33487853 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 346-637 |
| Cow position: | chr14:46513164-46513449 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 362-637 |
| Cow position: | chr14:38816187-38815897 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 92 |
Show alignments to all cow chromosomes.