Cow genome map

Conread name: Mixc-0029,d15

Conread position: 1-146
Cow position: chr11:4057270-4057122 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-151
Cow position: chr11:13066405-13066557 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 1-162
Cow position: chr11:28054356-28054519 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 139

Conread position: 1-167
Cow position: chr11:53286912-53287080 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 1-175
Cow position: chr11:10217074-10217245 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 96, 37

Conread position: 1-196
Cow position: chr11:52419650-52419446 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-199
Cow position: chr11:84389886-84389686 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 95, 138

Conread position: 1-200
Cow position: chr11:4270602-4270802 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 138

Conread position: 1-200
Cow position: chr11:44156993-44157194 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 141

Conread position: 1-200
Cow position: chr11:45111877-45111675 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-200
Cow position: chr11:47760437-47760638 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 1-200
Cow position: chr11:63655084-63655285 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 1-212
Cow position: chr11:29668356-29668567 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 111

Conread position: 1-221
Cow position: chr11:5342964-5343190 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 1-221
Cow position: chr11:15983878-15983651 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 1-221
Cow position: chr11:20733989-20734215 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 1-221
Cow position: chr11:28108403-28108177 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 1-221
Cow position: chr11:36743928-36744153 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 1-221
Cow position: chr11:64046251-64046025 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 1-221
Cow position: chr11:73477561-73477335 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 1-223
Cow position: chr11:4027307-4027531 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 86

Conread position: 1-223
Cow position: chr11:8245568-8245340 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 139

Conread position: 1-223
Cow position: chr11:9156900-9157122 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 165

Conread position: 1-223
Cow position: chr11:10090935-10090708 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 88

Conread position: 1-223
Cow position: chr11:11988367-11988139 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 46, 141

Conread position: 1-223
Cow position: chr11:24393580-24393351 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 140

Conread position: 1-223
Cow position: chr11:43514377-43514604 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 68

Conread position: 1-223
Cow position: chr11:58134647-58134419 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 46, 141

Conread position: 1-224
Cow position: chr11:19063997-19064225 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr11:26124669-26124899 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 62

Conread position: 1-226
Cow position: chr11:12358164-12358395 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 139

Conread position: 1-226
Cow position: chr11:44252052-44251827 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 139

Conread position: 1-226
Cow position: chr11:53431806-53432037 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 46, 139

Conread position: 1-228
Cow position: chr11:64081830-64082063 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 1-246
Cow position: chr11:28229505-28229758 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 37

Conread position: 1-251
Cow position: chr11:11677603-11677354 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 60

Conread position: 1-252
Cow position: chr11:9606324-9606578 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 130

Conread position: 1-252
Cow position: chr11:38835171-38835427 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 141

Conread position: 1-252
Cow position: chr11:67846318-67846575 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 1-252
Cow position: chr11:85393552-85393808 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 139

Conread position: 1-253
Cow position: chr11:12093814-12093561 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 120

Conread position: 1-256
Cow position: chr11:71329848-71329593 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 141

Conread position: 2-223
Cow position: chr11:41170434-41170661 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 138

Conread position: 5-221
Cow position: chr11:17107438-17107659 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 87

Conread position: 5-224
Cow position: chr11:10847699-10847473 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 136

Conread position: 9-252
Cow position: chr11:19102234-19102482 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 131

Conread position: 13-200
Cow position: chr11:36763001-36762815 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 47

Conread position: 13-246
Cow position: chr11:61400814-61401052 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 22

Conread position: 31-221
Cow position: chr11:57627824-57628019 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 162

Conread position: 32-200
Cow position: chr11:30188085-30187917 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 63

Conread position: 327-637
Cow position: chr11:30205582-30205900 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 92

Conread position: 336-530
Cow position: chr11:30187326-30187530 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 336-637
Cow position: chr11:13067011-13066700 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 64

Conread position: 340-627
Cow position: chr11:36713439-36713149 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 42

Conread position: 344-637
Cow position: chr11:36762135-36762431 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 352-634
Cow position: chr11:18073337-18073062 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 14, 92

Show alignments to all cow chromosomes.