Cow genome map
Conread name: | Mixc-0029,d15 |
Conread position: | 1-146 |
Cow position: | chr11:4057270-4057122 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-151 |
Cow position: | chr11:13066405-13066557 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-162 |
Cow position: | chr11:28054356-28054519 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 46, 139 |
Conread position: | 1-167 |
Cow position: | chr11:53286912-53287080 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-175 |
Cow position: | chr11:10217074-10217245 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 96, 37 |
Conread position: | 1-196 |
Cow position: | chr11:52419650-52419446 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 143 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-199 |
Cow position: | chr11:84389886-84389686 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 95, 138 |
Conread position: | 1-200 |
Cow position: | chr11:4270602-4270802 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 99, 138 |
Conread position: | 1-200 |
Cow position: | chr11:44156993-44157194 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 144 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 46, 141 |
Conread position: | 1-200 |
Cow position: | chr11:45111877-45111675 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 138 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-200 |
Cow position: | chr11:47760437-47760638 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-200 |
Cow position: | chr11:63655084-63655285 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 150 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-212 |
Cow position: | chr11:29668356-29668567 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 111 |
Conread position: | 1-221 |
Cow position: | chr11:5342964-5343190 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-221 |
Cow position: | chr11:15983878-15983651 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-221 |
Cow position: | chr11:20733989-20734215 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 160 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-221 |
Cow position: | chr11:28108403-28108177 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 159 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-221 |
Cow position: | chr11:36743928-36744153 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-221 |
Cow position: | chr11:64046251-64046025 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-221 |
Cow position: | chr11:73477561-73477335 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-223 |
Cow position: | chr11:4027307-4027531 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 86 |
Conread position: | 1-223 |
Cow position: | chr11:8245568-8245340 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 156 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 46, 139 |
Conread position: | 1-223 |
Cow position: | chr11:9156900-9157122 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 153 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 165 |
Conread position: | 1-223 |
Cow position: | chr11:10090935-10090708 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 46, 88 |
Conread position: | 1-223 |
Cow position: | chr11:11988367-11988139 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 46, 141 |
Conread position: | 1-223 |
Cow position: | chr11:24393580-24393351 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 43, 140 |
Conread position: | 1-223 |
Cow position: | chr11:43514377-43514604 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 164 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 46, 68 |
Conread position: | 1-223 |
Cow position: | chr11:58134647-58134419 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 46, 141 |
Conread position: | 1-224 |
Cow position: | chr11:19063997-19064225 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-225 |
Cow position: | chr11:26124669-26124899 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 168 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 39, 62 |
Conread position: | 1-226 |
Cow position: | chr11:12358164-12358395 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 168 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 46, 139 |
Conread position: | 1-226 |
Cow position: | chr11:44252052-44251827 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 46, 139 |
Conread position: | 1-226 |
Cow position: | chr11:53431806-53432037 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 169 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 46, 139 |
Conread position: | 1-228 |
Cow position: | chr11:64081830-64082063 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 164 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-246 |
Cow position: | chr11:28229505-28229758 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 176 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 46, 37 |
Conread position: | 1-251 |
Cow position: | chr11:11677603-11677354 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 171 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 46, 60 |
Conread position: | 1-252 |
Cow position: | chr11:9606324-9606578 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 175 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 50, 130 |
Conread position: | 1-252 |
Cow position: | chr11:38835171-38835427 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 186 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 43, 141 |
Conread position: | 1-252 |
Cow position: | chr11:67846318-67846575 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-252 |
Cow position: | chr11:85393552-85393808 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 181 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 46, 139 |
Conread position: | 1-253 |
Cow position: | chr11:12093814-12093561 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 169 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 46, 120 |
Conread position: | 1-256 |
Cow position: | chr11:71329848-71329593 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 182 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 46, 141 |
Conread position: | 2-223 |
Cow position: | chr11:41170434-41170661 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 45, 138 |
Conread position: | 5-221 |
Cow position: | chr11:17107438-17107659 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 42, 87 |
Conread position: | 5-224 |
Cow position: | chr11:10847699-10847473 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 162 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 9, 136 |
Conread position: | 9-252 |
Cow position: | chr11:19102234-19102482 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 13-200 |
Cow position: | chr11:36763001-36762815 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 34, 47 |
Conread position: | 13-246 |
Cow position: | chr11:61400814-61401052 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 166 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 85, 22 |
Conread position: | 31-221 |
Cow position: | chr11:57627824-57628019 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 16, 162 |
Conread position: | 32-200 |
Cow position: | chr11:30188085-30187917 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 15, 63 |
Conread position: | 327-637 |
Cow position: | chr11:30205582-30205900 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 92 |
Conread position: | 336-530 |
Cow position: | chr11:30187326-30187530 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 336-637 |
Cow position: | chr11:13067011-13066700 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 230 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 32, 64 |
Conread position: | 340-627 |
Cow position: | chr11:36713439-36713149 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 42 |
Conread position: | 344-637 |
Cow position: | chr11:36762135-36762431 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 112 |
Conread position: | 352-634 |
Cow position: | chr11:18073337-18073062 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 205 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 14, 92 |
Show alignments to all cow chromosomes.