Cow genome map
| Conread name: | Mixc-0029,d15 |
| Conread position: | 1-125 |
| Cow position: | chr13:18331733-18331607 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-174 |
| Cow position: | chr13:34910840-34911014 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 1-176 |
| Cow position: | chr13:13900190-13900014 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 1-199 |
| Cow position: | chr13:41316178-41315978 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-200 |
| Cow position: | chr13:3653996-3654196 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 1-200 |
| Cow position: | chr13:21132268-21132061 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-200 |
| Cow position: | chr13:21839879-21840080 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-200 |
| Cow position: | chr13:30303604-30303401 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 142 |
| Conread position: | 1-200 |
| Cow position: | chr13:32545702-32545501 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-200 |
| Cow position: | chr13:34048948-34048748 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 1-200 |
| Cow position: | chr13:34869066-34868867 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 1-215 |
| Cow position: | chr13:58118589-58118808 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr13:3057791-3058017 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr13:30244359-30244585 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr13:32985027-32985253 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr13:60466654-60466430 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 1-223 |
| Cow position: | chr13:1592831-1593059 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr13:4941407-4941186 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr13:9044826-9044598 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-223 |
| Cow position: | chr13:30238570-30238343 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 1-223 |
| Cow position: | chr13:34042043-34042271 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-223 |
| Cow position: | chr13:35757567-35757339 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-226 |
| Cow position: | chr13:31556398-31556621 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 1-231 |
| Cow position: | chr13:20541710-20541948 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 1-238 |
| Cow position: | chr13:15520186-15520418 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 131 |
| Conread position: | 1-245 |
| Cow position: | chr13:30656656-30656903 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 167 |
| Conread position: | 1-245 |
| Cow position: | chr13:32737502-32737751 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 61 |
| Conread position: | 1-252 |
| Cow position: | chr13:13325068-13324811 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-252 |
| Cow position: | chr13:15924058-15924314 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-252 |
| Cow position: | chr13:23002983-23003239 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 242 |
| Conread position: | 1-252 |
| Cow position: | chr13:33336102-33336349 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 1-252 |
| Cow position: | chr13:47229682-47229939 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-252 |
| Cow position: | chr13:49974003-49973746 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 5-221 |
| Cow position: | chr13:31733770-31733992 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 9-248 |
| Cow position: | chr13:29202040-29202287 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 46-200 |
| Cow position: | chr13:2388545-2388700 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 336-603 |
| Cow position: | chr13:21131436-21131712 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 338-632 |
| Cow position: | chr13:22185491-22185204 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 340-637 |
| Cow position: | chr13:34048362-34048657 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 342-629 |
| Cow position: | chr13:29202622-29202339 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 128, 100 |
| Conread position: | 414-637 |
| Cow position: | chr13:31556905-31556677 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 5 |
Show alignments to all cow chromosomes.