Cow genome map
| Conread name: | Mixc-0029,d15 |
| Conread position: | 1-131 |
| Cow position: | chr16:41755857-41755989 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-165 |
| Cow position: | chr16:42739251-42739417 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 150 |
| Conread position: | 1-175 |
| Cow position: | chr16:15476698-15476522 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-176 |
| Cow position: | chr16:4479128-4479305 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 1-186 |
| Cow position: | chr16:28437530-28437719 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-196 |
| Cow position: | chr16:24105558-24105363 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 95, 138 |
| Conread position: | 1-196 |
| Cow position: | chr16:53046203-53046006 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-200 |
| Cow position: | chr16:15493085-15492883 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 1-200 |
| Cow position: | chr16:15566597-15566395 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 1-200 |
| Cow position: | chr16:18498465-18498663 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 1-200 |
| Cow position: | chr16:29033897-29033702 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-200 |
| Cow position: | chr16:29090424-29090627 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 1-220 |
| Cow position: | chr16:14665957-14666182 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-221 |
| Cow position: | chr16:32588-32362 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr16:25188483-25188259 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 1-221 |
| Cow position: | chr16:28170517-28170741 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 1-221 |
| Cow position: | chr16:31832481-31832255 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-222 |
| Cow position: | chr16:25892572-25892347 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 139 |
| Conread position: | 1-222 |
| Cow position: | chr16:40296322-40296549 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-223 |
| Cow position: | chr16:407176-407404 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-223 |
| Cow position: | chr16:2483285-2483512 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr16:2727432-2727660 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-223 |
| Cow position: | chr16:5484175-5483947 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-223 |
| Cow position: | chr16:8816250-8816478 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 1-223 |
| Cow position: | chr16:12538070-12538298 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-223 |
| Cow position: | chr16:15184651-15184431 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 1-223 |
| Cow position: | chr16:23252651-23252878 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 1-223 |
| Cow position: | chr16:23983164-23982938 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 1-223 |
| Cow position: | chr16:25341813-25341593 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 1-223 |
| Cow position: | chr16:31592058-31592286 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-223 |
| Cow position: | chr16:43897416-43897643 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 1-224 |
| Cow position: | chr16:10203584-10203807 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 108 |
| Conread position: | 1-224 |
| Cow position: | chr16:41163210-41163439 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-225 |
| Cow position: | chr16:26663607-26663377 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 1-226 |
| Cow position: | chr16:25171207-25170977 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-249 |
| Cow position: | chr16:836902-836645 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-252 |
| Cow position: | chr16:1567598-1567854 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-252 |
| Cow position: | chr16:2411112-2411368 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-252 |
| Cow position: | chr16:10438091-10437841 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 1-252 |
| Cow position: | chr16:28471247-28471502 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 1-252 |
| Cow position: | chr16:29046877-29046621 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 2-241 |
| Cow position: | chr16:16271748-16271989 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 5-221 |
| Cow position: | chr16:4302489-4302708 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 293-637 |
| Cow position: | chr16:28438183-28437834 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 334-498 |
| Cow position: | chr16:41757271-41757104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 338-637 |
| Cow position: | chr16:25170599-25170897 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 489-633 |
| Cow position: | chr16:41756895-41756755 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 34 |
Show alignments to all cow chromosomes.