Cow genome map
| Conread name: | Mixc-0029,d15 |
| Conread position: | 1-196 |
| Cow position: | chr17:4060532-4060335 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-199 |
| Cow position: | chr17:11376357-11376557 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-220 |
| Cow position: | chr17:14040603-14040820 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 1-220 |
| Cow position: | chr17:20087314-20087539 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 1-221 |
| Cow position: | chr17:15142940-15143166 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr17:15436218-15435992 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr17:23324027-23324253 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 1-221 |
| Cow position: | chr17:24782592-24782368 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 1-223 |
| Cow position: | chr17:2580049-2579820 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-223 |
| Cow position: | chr17:3642401-3642631 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 1-223 |
| Cow position: | chr17:5227049-5226822 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 103, 140 |
| Conread position: | 1-223 |
| Cow position: | chr17:6068988-6068765 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr17:11087293-11087519 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 1-223 |
| Cow position: | chr17:15324255-15324027 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-223 |
| Cow position: | chr17:18103256-18103480 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 1-224 |
| Cow position: | chr17:31767612-31767841 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-226 |
| Cow position: | chr17:15384714-15384482 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-233 |
| Cow position: | chr17:16857092-16857329 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 142 |
| Conread position: | 1-240 |
| Cow position: | chr17:1880517-1880279 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 128 |
| Conread position: | 1-246 |
| Cow position: | chr17:14307638-14307890 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 1-252 |
| Cow position: | chr17:6120138-6119878 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 1-252 |
| Cow position: | chr17:6260276-6260022 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-252 |
| Cow position: | chr17:14216606-14216856 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 1-252 |
| Cow position: | chr17:14894587-14894330 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 1-252 |
| Cow position: | chr17:15850831-15850574 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 46, 228 |
| Conread position: | 1-252 |
| Cow position: | chr17:20665298-20665556 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-253 |
| Cow position: | chr17:227881-228139 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 46, 228 |
| Conread position: | 2-223 |
| Cow position: | chr17:19268935-19269161 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 8-220 |
| Cow position: | chr17:43952143-43952361 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 13-221 |
| Cow position: | chr17:1382399-1382613 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 13-223 |
| Cow position: | chr17:40805239-40805023 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 130 |
| Conread position: | 294-631 |
| Cow position: | chr17:15384053-15384406 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.